YRC Public Data Repository - Protein Structure Prediction

Protein:	YHBS_ECOLI
Organism:	Escherichia coli
Length:	167 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHBS_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	130.0	[0..1]	[144..4]
gi\|52548790 - gi\|52548790\|gb\|AAU82639.1\| probable acetyltransferase [uncultured archaeon GZfos18H11]	128.0	[0..1]	[166..3]
gi\|90412495, gi\|... - gi\|90412495\|ref\|ZP_01220498.1\| putative acetyltransferase [Photobacterium profundum 3TCK], gi\|903265...	126.0	[0..1]	[167..1]
gi\|54307825, gi\|... - gi\|54307825\|ref\|YP_128845.1\| putative acetyltransferase [Photobacterium profundum SS9], gi\|46912248\|...	126.0	[0..1]	[167..1]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	125.0	[0..1]	[144..3]
gi\|113896628, gi... - gi\|113941725\|ref\|ZP_01427509.1\| GCN5-related N-acetyltransferase [Herpetosiphon aurantiacus ATCC 237...	125.0	[0..1]	[166..67]
gi\|36787763, gi\|... - gi\|37528325\|ref\|NP_931670.1\| hypothetical protein plu4504 [Photorhabdus luminescens subsp. laumondii...	123.0	[0..1]	[167..1]
gi\|89155489, gi\|... - gi\|89206608\|ref\|ZP_01185164.1\| GCN5-related N-acetyltransferase [Bacillus weihenstephanensis KBAB4],...	122.0	[0..1]	[166..2]
gi\|152022841, gi... - gi\|89203282\|ref\|ZP_01181966.1\| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus subsp. c...	121.0	[0..1]	[146..15]
gi\|222526631, gi... - gi\|222526631\|ref\|YP_002571102.1\| GCN5-related N-acetyltransferase [Chloroflexus sp. Y-400-fl], gi\|22... gi\|76164374, gi\|... - gi\|76260740\|ref\|ZP_00768370.1\| GCN5-related N-acetyltransferase [Chloroflexus aurantiacus J-10-fl], ... gi\|53796824 - ref\|ZP_00357738.1\| COG3153: Predicted acetyltransferase [Chloroflexus aurantiacus]	121.0	[0..2]	[165..4]

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Predicted Domain #1

Region A:
Residues: [1-167]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIRVEIPID APGIDALLRR SFESDAEAKL VHDLREDGFL TLGLVATDDE GQVIGYVAFS  60
   61 PVDVQGEDLQ WVGMAPLAVD EKYRGQGLAR QLVYEGLDSL NEFGYAAVVT LGDPALYSRF 120
  121 GFELAAHHDL RCRWPGTESA FQVHRLADDA LNGVTGLVEY HEHFNRF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	20.0
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.34977492703662	bayes_pls_golite062009
transferase activity	1.85190002724385	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
N-acyltransferase activity	1.18143103040425	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
N-acetyltransferase activity	0.796917859235554	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: