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View Structure Prediction Details

Protein: y-PA
Organism: Drosophila melanogaster
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for y-PA.

Description E-value Query
Range
Subject
Range
YELL_DROYA - Protein yellow OS=Drosophila yakuba GN=y PE=3 SV=1
779.0 [0..1] [541..1]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQDKGWILV TLITLVTPSW AAYKLQERYS WSQLDFAFPN TRLKDQALAS GDYIPQNALP  60
   61 VGVEHFGNRL FVTVPRWRDG IPATLTYINM DRSLTGSPEL IPYPDWRSNT AGDCANSITT 120
  121 AYRIKVDECG RLWVLDTGTV GIGNTTTNPC PYAVNVFDLT TDTRIRRYEL PGVDTNPNTF 180
  181 IANIAVDIGK NCDDAYAYFA DELGYGLIAY SWELNKSWRF SAHSYFFPDP LRGDFNVAGI 240
  241 NFQWGEEGIF GMSLSPIRSD GYRTLYFSPL ASHRQFAVST RILRDETRTE DSYHDFVALD 300
  301 ERGPNSHTTS RVMSDDGIEL FNLIDQNAVG CWHSSMPYSP QFHGIVDRDD VGLVFPADVK 360
  361 IDENKNVWVL SDRMPVFLLS DLDYSDTNFR IYTAPLATLI ENTVCDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.221849
Match: 2qe8A
Description: No description for 2qe8A was found.

Predicted Domain #2
Region A:
Residues: [408-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNNAYGPPNT VSIPKQAVLP MGPPLYTKQY RPVLPQKPQT SWASSPPPPS RTYLPANSGN  60
   61 VVSSISVSTN SVGPAGVEVP KAYIFNQHNG INYETSGPHL FPTHQPAQPG GQDGGLKTYV 120
  121 NARQSGWWHH QHQG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle