YRC Public Data Repository - Protein Structure Prediction

Protein:	YEJL_ECOLI
Organism:	Escherichia coli
Length:	75 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEJL_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|45435579, gi\|... - gi\|45440721\|ref\|NP_992260.1\| hypothetical protein YP_0880 [Yersinia pestis biovar Microtus str. 9100... gi\|21959827, gi\|... - gi\|22126800\|ref\|NP_670223.1\| hypothetical protein y2923 [Yersinia pestis KIM], gi\|21959827\|gb\|AAM864...	124.0	[0..1]	[75..12]
gi\|238722272, gi... - gi\|77975403\|ref\|ZP_00830938.1\| COG3082: Uncharacterized protein conserved in bacteria [Yersinia fred...	122.0	[0..1]	[75..1]
sp\|B7UFK4\|YEJL_ECO27 - UPF0352 protein yejL OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=yejL PE=3 SV=1 YEJL_ECO27 - UPF0352 protein YejL OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=yejL PE=3 SV=1 YEJL_ECO45 - UPF0352 protein YejL OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=yejL PE=3 SV=1 YEJL_ECOL5 - UPF0352 protein YejL OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yejL PE=3 SV=1 YEJL_ECOSM - UPF0352 protein YejL OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yejL PE=3 SV=1 YEJL_ECOUT - UPF0352 protein YejL OS=Escherichia coli (strain UTI89 / UPEC) GN=yejL PE=3 SV=1 YEJL_ECO7I - UPF0352 protein YejL OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=yejL PE=3 SV=1 gi\|237704662, gi... - gi\|237704662\|ref\|ZP_04535143.1\| yejL [Escherichia sp. 3_2_53FAA], gi\|226901028\|gb\|EEH87287.1\| yejL [... gi\|75243005, gi\|... - gi\|75243005\|ref\|ZP_00726711.1\| COG3082: Uncharacterized protein conserved in bacteria [Escherichia c...	122.0	[0..1]	[75..1]
Y1297_YERPS - UPF0352 protein YPTB1297 OS=Yersinia pseudotuberculosis GN=YPTB1297 PE=3 SV=1 gi\|238796848, gi... - gi\|77962644\|ref\|ZP_00826462.1\| COG3082: Uncharacterized protein conserved in bacteria [Yersinia moll... Y1485_YERPG - UPF0352 protein YpAngola_A1485 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=YpAngola_A1485 PE=3... Y2722_YERP3 - UPF0352 protein YpsIP31758_2722 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=Yp... gi\|149291129, gi... - gi\|149366755\|ref\|ZP_01888789.1\| hypothetical protein YPE_1993 [Yersinia pestis CA88-4125], gi\|149291... Y2433_YERPP - UPF0352 protein YPDSF_2433 OS=Yersinia pestis (strain Pestoides F) GN=YPDSF_2433 PE=3 SV=1 gi\|167400322, gi... - gi\|167400322\|ref\|ZP_02305835.1\| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. ... gi\|166211371, gi... - gi\|166211371\|ref\|ZP_02237406.1\| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. ... gi\|167424095, gi... - gi\|167424095\|ref\|ZP_02315848.1\| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis s... gi\|167419498, gi... - gi\|167419498\|ref\|ZP_02311251.1\| conserved hypothetical protein [Yersinia pestis biovar Orientalis st... Y1389_YERPB - UPF0352 protein YPTS_1389 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=YPTS_1389 PE=... gi\|165936111, gi... - gi\|89103605\|ref\|ZP_01176175.1\| COG3082: Uncharacterized protein conserved in bacteria [Yersinia pest... Y2797_YERPY - UPF0352 protein YPK_2797 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=YPK_2797 PE=3... Y979_YERPA - UPF0352 protein YPA_0979 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=YPA_0979 PE=3 SV=1 Y2715_YERPN - UPF0352 protein YPN_2715 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=YPN_2715 PE=3 SV=1 gi\|229841210, gi... - gi\|229841210\|ref\|ZP_04461369.1\| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2], gi... Y1297_YERPS - UPF0352 protein YPTB1297 OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=YPTB1297 PE=3... gi\|161511423 - gi\|161511423\|ref\|NP_992260.2\| hypothetical protein YP_0880 [Yersinia pestis biovar Microtus str. 910... gi\|229689662, gi... - gi\|229843315\|ref\|ZP_04463461.1\| conserved protein [Yersinia pestis biovar Orientalis str. India 195]... Y1261_YERPE - UPF0352 protein YPO1261/y2923/YP_0880 OS=Yersinia pestis GN=YPO1261 PE=3 SV=1 gi\|161484772 - gi\|161484772\|ref\|NP_670223.2\| hypothetical protein y2923 [Yersinia pestis KIM] gi\|229703843, gi... - gi\|229894178\|ref\|ZP_04509363.1\| conserved protein [Yersinia pestis Pestoides A], gi\|229703843\|gb\|EEO... gi\|166009736, gi... - gi\|166009736\|ref\|ZP_02230634.1\| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. ... gi\|218928415, gi... - gi\|218928415\|ref\|YP_002346290.1\| hypothetical protein YPO1261 [Yersinia pestis CO92], gi\|16121547\|re... gi\|165924461, gi... - gi\|165924461\|ref\|ZP_02220293.1\| conserved hypothetical protein [Yersinia pestis biovar Orientalis st... Y1420_YERE8 - UPF0352 protein YE1420 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 808...	121.0	[0..1]	[75..1]
YEJL_SHIF8 - UPF0352 protein YejL OS=Shigella flexneri serotype 5b (strain 8401) GN=yejL PE=3 SV=1 gi\|24113576, gi\|... - gi\|24113576\|ref\|NP_708086.1\| hypothetical protein SF2274 [Shigella flexneri 2a str. 301], gi\|2405262... gi\|30041883, gi\|... - gi\|30063630\|ref\|NP_837801.1\| hypothetical protein S2403 [Shigella flexneri 2a str. 2457T], gi\|300418... YEJL_SHIFL - UPF0352 protein YejL OS=Shigella flexneri GN=yejL PE=3 SV=1	120.0	[0..1]	[75..1]
YEJL_ECO24 - UPF0352 protein YejL OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=yejL PE=3 SV=1	120.0	[0..1]	[75..1]
gi\|238714827, gi... - gi\|77958522\|ref\|ZP_00822554.1\| COG3082: Uncharacterized protein conserved in bacteria [Yersinia berc...	119.0	[0..1]	[75..1]
YEJL_SHIDS - UPF0352 protein YejL OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=yejL PE=3 SV=1	119.0	[0..1]	[75..1]
gi\|192958497, gi... - gi\|75237983\|ref\|ZP_00721988.1\| COG3082: Uncharacterized protein conserved in bacteria [Escherichia c...	119.0	[0..1]	[75..1]
Y2871_PHOLL - UPF0352 protein plu2871 OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 ... Y2871_PHOLL - UPF0352 protein plu2871 OS=Photorhabdus luminescens subsp. laumondii GN=plu2871 PE=3 SV=1	118.0	[0..1]	[75..1]

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Predicted Domain #1

Region A:
Residues: [1-75]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQISRYSDE QVEQLLAELL NVLEKHKAPT DLSLMVLGNM VTNLINTSIA PAQRQAIANS  60
   61 FARALQSSIN EDKAH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.69897
Match:	2jrxA
Description:	No description for 2jrxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits