YRC Public Data Repository - Protein Structure Prediction

Protein:	YEDJ_ECOLI
Organism:	Escherichia coli
Length:	231 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEDJ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|91211181, gi\|... - gi\|91211181\|ref\|YP_541167.1\| hypothetical protein UTI89_C2163 [Escherichia coli UTI89], gi\|91072755\|...	180.0	[0..1]	[231..10]
gi\|193071322, gi... - gi\|75215145\|ref\|ZP_00713593.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli E110019... gi\|188489390, gi... - gi\|188494191\|ref\|ZP_03001461.1\| putative metal-dependent phosphohydrolase [Escherichia coli 53638], ...	180.0	[0..1]	[231..1]
gi\|218558818, gi... - gi\|218558818\|ref\|YP_002391731.1\| hypothetical protein ECS88_2015 [Escherichia coli S88], gi\|21836558... gi\|117624100, gi... - gi\|117624100\|ref\|YP_853013.1\| hypothetical protein APECO1_999 [Escherichia coli APEC O1], gi\|1155132...	180.0	[0..1]	[231..1]
gi\|191173297, gi... - gi\|75239145\|ref\|ZP_00723122.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli F11], g... gi\|110642067, gi... - gi\|110642067\|ref\|YP_669797.1\| hypothetical protein ECP_1895 [Escherichia coli 536], gi\|110343659\|gb\|... gi\|218369463, gi... - gi\|218699477\|ref\|YP_002407106.1\| hypothetical protein ECIAI39_1094 [Escherichia coli IAI39], gi\|2183...	179.0	[0..1]	[231..1]
gi\|83584528, gi\|... - gi\|83584528\|ref\|ZP_00923204.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli 101-1],...	178.0	[0..1]	[231..1]
gi\|192925711, gi... - gi\|75255230\|ref\|ZP_00727078.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli E22], g... gi\|190900715, gi... - gi\|75227468\|ref\|ZP_00714235.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli B7A], g... gi\|75208273, gi\|... - gi\|75208273\|ref\|ZP_00708630.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli B171], ... gi\|75190979, gi\|... - gi\|75190979\|ref\|ZP_00704246.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli E24377A... gi\|170520989, gi... - gi\|170683271\|ref\|YP_001743284.1\| putative metal-dependent phosphohydrolase [Escherichia coli SMS-3-5... gi\|218689957, gi... - gi\|218689957\|ref\|YP_002398169.1\| hypothetical protein ECED1_2229 [Escherichia coli ED1a], gi\|2184275...	177.0	[0..1]	[231..1]
gi\|75176957, gi\|... - gi\|75176957\|ref\|ZP_00697064.1\| COG1418: Predicted HD superfamily hydrolase [Shigella boydii BS512], ... gi\|81244991, gi\|... - gi\|82543580\|ref\|YP_407527.1\| hypothetical protein SBO_1046 [Shigella boydii Sb227], gi\|81244991\|gb\|A...	176.0	[0..1]	[231..1]
gi\|25305031, gi\|... - pir\|\|D85814 hypothetical protein yedJ [imported] - Escherichia coli (strain O157:H7, substrain EDL9... gi\|15802396, gi\|... - gi\|15802396\|ref\|NP_288422.1\| hypothetical protein Z3055 [Escherichia coli O157:H7 EDL933], gi\|125160... gi\|15831954, gi\|... - gi\|15831954\|ref\|NP_310727.1\| hypothetical protein ECs2700 [Escherichia coli O157:H7], gi\|13362168\|db... gi\|208810507, gi... - gi\|208810507\|ref\|ZP_03252383.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 ... gi\|195939268 - gi\|195939268\|ref\|ZP_03084650.1\| hypothetical protein EscherichcoliO157_23078 [Escherichia coli O157:... gi\|15831954, gi\|... - gi\|15831954\|ref\|NP_310727.1\| hypothetical protein ECs2700 [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|189376148, gi... - gi\|189376148\|gb\|EDU94564.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str.... gi\|189371012, gi... - gi\|189371012\|gb\|EDU89428.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str.... gi\|254793612, gi... - gi\|254793612\|ref\|YP_003078449.1\| predicted phosphohydrolase [Escherichia coli O157:H7 str. TW14359],... gi\|217328716, gi... - gi\|217328716\|ref\|ZP_03444797.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 ... gi\|209162196, gi... - gi\|209400796\|ref\|YP_002271077.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7... gi\|208741486, gi... - gi\|208821363\|ref\|ZP_03261683.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 ... gi\|208816519, gi... - gi\|208816519\|ref\|ZP_03257639.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 ... gi\|168752206, gi... - gi\|188013894\|gb\|EDU52016.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str.... gi\|188999257, gi... - gi\|188999257\|gb\|EDU68243.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str.... gi\|168777718, gi... - gi\|187767092\|gb\|EDU30936.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str.... gi\|168771616, gi... - gi\|189359662\|gb\|EDU78081.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str.... gi\|189366013, gi... - gi\|189366013\|gb\|EDU84429.1\| putative metal-dependent phosphohydrolase [Escherichia coli O157:H7 str....	175.0	[0..1]	[231..1]
gi\|157161431, gi... - gi\|75196018\|ref\|ZP_00706088.1\| COG1418: Predicted HD superfamily hydrolase [Escherichia coli HS], gi...	162.0	[0..20]	[231..15]
gi\|83849961, gi\|... - gi\|83856161\|ref\|ZP_00949690.1\| metal-dependent phosphohydrolase [Croceibacter atlanticus HTCC2559], ...	159.0	[0..2]	[215..5]

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Predicted Domain #1

Region A:
Residues: [1-231]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQHWQAQF ENWLKNHHQH QDAAHDVCHF RRVWATAQKL AADDDVDMLV ILTACYFHDI  60
   61 VSLAKNHPQR QRSSILAAEE TRRLLREEFE QFPAEKIEAV CHAIAAHSFS AQIAPLTTEA 120
  121 KIVQDADRLE ALGAIGLARV FAVSGALGVA LFDGEDPFAQ HRPLDDKRYA LDHFQTKLLK 180
  181 LPQTMQTARG KQLAQHNAHF LVEFMAKLSA ELAGENEGVD HKVIDAFSSA G

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.522879
Match:	2pjqA
Description:	No description for 2pjqA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.674493414202885	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: