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View Structure Prediction Details

Protein: YECP_ECOLI
Organism: Escherichia coli
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YECP_ECOLI.

Description E-value Query
Range		 Subject
Range
CMOB_SHEPC - tRNA U34 carboxymethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=cmoB P...
 285.0 [0..1] [322..1]
SO2436 - methyltransferase putative
CMOB_SHEON - tRNA U34 carboxymethyltransferase OS=Shewanella oneidensis (strain MR-1) GN=cmoB PE=3 SV=1
 285.0 [0..1] [322..1]
CMOB_SHEB9 - tRNA U34 carboxymethyltransferase OS=Shewanella baltica (strain OS195) GN=cmoB PE=3 SV=1
CMOB_SHEB2 - tRNA U34 carboxymethyltransferase OS=Shewanella baltica (strain OS223) GN=cmoB PE=3 SV=1
CMOB_SHEB8 - tRNA U34 carboxymethyltransferase OS=Shewanella baltica (strain OS185) GN=cmoB PE=3 SV=1
 284.0 [0..1] [322..1]
CMOB_SHEB5 - tRNA U34 carboxymethyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=cmoB PE=3 ...
 283.0 [0..1] [322..1]
CMOB_SHESR - tRNA U34 carboxymethyltransferase OS=Shewanella sp. (strain MR-7) GN=cmoB PE=3 SV=1
 283.0 [0..1] [322..1]
CMOB_SHELP - tRNA U34 carboxymethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=cmoB PE=3 S...
 282.0 [0..1] [322..1]
CMOB_SHESM - tRNA U34 carboxymethyltransferase OS=Shewanella sp. (strain MR-4) GN=cmoB PE=3 SV=1
CMOB_SHESA - tRNA U34 carboxymethyltransferase OS=Shewanella sp. (strain ANA-3) GN=cmoB PE=3 SV=1
 282.0 [0..1] [322..1]
CMOB_SHEFN - tRNA U34 carboxymethyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=cmoB PE=3 SV=1
 282.0 [0..1] [322..1]
CMOB_SHESW - tRNA U34 carboxymethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=cmoB PE=3 SV=1
 282.0 [0..1] [322..1]
CMOB_PSYIN - tRNA U34 carboxymethyltransferase OS=Psychromonas ingrahamii (strain 37) GN=cmoB PE=3 SV=1
 280.0 [0..1] [322..1]

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Predicted Domain #1
Region A:
Residues: [1-323] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDFGNFYSL IAKNHLSHWL ETLPAQIANW QREQQHGLFK QWSNAVEFLP EIKPYRLDLL  60
   61 HSVTAESEEP LSAGQIKRIE TLMRNLMPWR KGPFSLYGVN IDTEWRSDWK WDRVLPHLSD 120
  121 LTGRTILDVG CGSGYHMWRM IGAGAHLAVG IDPTQLFLCQ FEAVRKLLGN DQRAHLLPLG 180
  181 IEQLPALKAF DTVFSMGVLY HRRSPLEHLW QLKDQLVNEG ELVLETLVID GDENTVLVPG 240
  241 DRYAQMRNVY FIPSALALKN WLKKCGFVDI RIADVSVTTT EEQRRTEWMV TESLADFLDP 300
  301 HDPGKTVEGY PAPKRAVLIA RKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.522879
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 0.999964866871553 bayes_pls_golite062009
methyltransferase activity 0.558878917426836 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.557560946446304 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.0605581837493382 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle