Protein: | YBCO_ECOLI |
Organism: | Escherichia coli |
Length: | 96 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBCO_ECOLI.
Description | E-value | Query Range |
Subject Range |
|
164.0 | [0..1] | [96..41] |
|
154.0 | [0..1] | [96..1] |
|
154.0 | [0..1] | [95..1] |
|
152.0 | [0..1] | [96..1] |
|
152.0 | [0..2] | [96..4] |
|
151.0 | [0..1] | [96..1] |
|
151.0 | [0..1] | [95..1] |
|
151.0 | [0..1] | [95..1] |
|
151.0 | [0..1] | [94..1] |
|
150.0 | [0..1] | [95..1] |
Region A: Residues: [1-96] |
1 11 21 31 41 51 | | | | | | 1 MADLRKAARG RECQVRIPGV CNGNPETSVL AHIRLTGLCG TGTKPPDLIA TIACSACHDE 60 61 IDRRTHFVDA GYAKECALEG MARTQVIWLK EGVIKA |
Detection Method: | |
Confidence: | 73.508638 |
Match: | PF07102.3 |
Description: | No description for PF07102.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.878 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.865 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.864 | N/A | N/A | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
View | Download | 0.857 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
View | Download | 0.853 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
View | Download | 0.714 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.703 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.700 | N/A | N/A | a.230.1 | Description not found. |
View | Download | 0.698 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
View | Download | 0.592 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
View | Download | 0.413 | N/A | N/A | a.74.1 | Cyclin-like |
View | Download | 0.298 | N/A | N/A | a.74.1 | Cyclin-like |
View | Download | 0.290 | N/A | N/A | a.4.1 | Homeodomain-like |
View | Download | 0.286 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
View | Download | 0.283 | N/A | N/A | d.110.4 | SNARE-like |