YRC Public Data Repository - Protein Structure Prediction

Protein:	YAIN_ECOLI
Organism:	Escherichia coli
Length:	91 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAIN_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|86606913 - gi\|86606913\|ref\|YP_475676.1\| hypothetical protein CYA_2277 [Cyanobacteria bacterium Yellowstone A-Pr... gi\|86555455, gi\|... - gi\|86606913\|ref\|YP_475676.1\| hypothetical protein CYA_2277 [Synechococcus sp. JA-3-3Ab], gi\|86555455...	115.0	[0..2]	[90..77]
gi\|67984802, gi\|... - gi\|69292279\|ref\|ZP_00619458.1\| Protein of unknown function DUF156 [Kineococcus radiotolerans SRS3021...	114.0	[0..3]	[91..72]
gi\|119954021, gi... - gi\|90202048\|ref\|ZP_01204694.1\| Protein of unknown function DUF156 [Mycobacterium vanbaalenii PYR-1],...	110.0	[0..7]	[91..59]
gi\|78692902, gi\|... - gi\|78692902\|ref\|ZP_00857416.1\| similar to Uncharacterized protein conserved in bacteria [Bradyrhizob...	109.0	[0..1]	[91..87]
gi\|91692679, gi\|... - gi\|91780019\|ref\|YP_555227.1\| hypothetical protein Bxe_B0049 [Burkholderia xenovorans LB400], gi\|9169...	109.0	[0..1]	[91..1]
gi\|86556487, gi\|... - gi\|86607945\|ref\|YP_476707.1\| hypothetical protein CYB_0450 [Synechococcus sp. JA-2-3B'a(2-13)], gi\|8... gi\|86607945 - gi\|86607945\|ref\|YP_476707.1\| hypothetical protein CYB_0450 [Cyanobacteria bacterium Yellowstone B-Pr...	108.0	[0..2]	[90..43]
gi\|228670001, gi... - gi\|229113483\|ref\|ZP_04242933.1\| DNA mismatch repair protein, C-terminal domain protein [Bacillus cer... gi\|116585166, gi... - gi\|190015485\|ref\|YP_001967096.1\| hypothetical protein pPER272_0232 [Bacillus cereus], gi\|190015220\|r... gi\|218848376, gi... - gi\|218848376\|ref\|YP_002455161.1\| YvgZ [Bacillus cereus AH820], gi\|218540427\|gb\|ACK92823.1\| YvgZ [Bac... gi\|44004522, gi\|... - gi\|44004522\|ref\|NP_982190.1\| hypothetical protein BCE_A0183 [Bacillus cereus ATCC 10987], gi\|4274158...	108.0	[0..2]	[91..15]
gi\|7469413 - pir\|\|S76074 hypothetical protein - Synechocystis sp. (strain PCC 6803) gi\|1001429, gi\|1... - gi\|16331254\|ref\|NP_441982.1\| hypothetical protein sll0176 [Synechocystis sp. PCC 6803], gi\|1001429\|d...	108.0	[0..3]	[90..81]
gi\|52005069, gi\|... - gi\|52787245\|ref\|YP_093074.1\| YvgZ [Bacillus licheniformis ATCC 14580], gi\|52349747\|gb\|AAU42381.1\| Yv...	107.0	[0..2]	[91..11]
gi\|107027103, gi... - gi\|67655044\|ref\|ZP_00452431.1\| Protein of unknown function DUF156 [Burkholderia cenocepacia AU 1054]... gi\|116649504, gi... - gi\|67661535\|ref\|ZP_00458827.1\| Protein of unknown function DUF156 [Burkholderia cenocepacia HI2424],...	107.0	[0..1]	[91..1]

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Predicted Domain #1

Region A:
Residues: [1-91]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSTPEEKKK VLTRVRRIRG QIDALERSLE GDAECRAILQ QIAAVRGAAN GLMAEVLESH  60
   61 IRETFDRNDC YSREVSQSVD DTIELVRAYL K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.69897
Match:	2hh7A
Description:	No description for 2hh7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits