YRC Public Data Repository - Protein Structure Prediction

Protein:	YAER_ECOLI
Organism:	Escherichia coli
Length:	129 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAER_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|71669193, gi\|... - gi\|71677562\|ref\|ZP_00675298.1\| Glyoxalase I [Trichodesmium erythraeum IMS101], gi\|71669193\|gb\|EAO258...	135.0	[0..5]	[128..1]
gi\|227081184, gi... - gi\|227081184\|ref\|YP_002809735.1\| lactoylglutathione lyase [Vibrio cholerae M66-2], gi\|227009072\|gb\|A... gi\|153829533, gi... - gi\|153829533\|ref\|ZP_01982200.1\| lactoylglutathione lyase [Vibrio cholerae 623-39], gi\|148874993\|gb\|E... gi\|229350904, gi... - gi\|229510939\|ref\|ZP_04400418.1\| lactoylglutathione lyase [Vibrio cholerae B33], gi\|229350904\|gb\|EEO1... gi\|229515396, gi... - gi\|229515396\|ref\|ZP_04404855.1\| lactoylglutathione lyase [Vibrio cholerae TMA 21], gi\|229347165\|gb\|E... gi\|9655474, gi\|1... - gi\|9655474\|gb\|AAF94171.1\| lactoylglutathione lyase [Vibrio cholerae O1 biovar El Tor str. N16961], g... gi\|227012827, gi... - gi\|227117377\|ref\|YP_002819273.1\| lactoylglutathione lyase [Vibrio cholerae O395], gi\|227012827\|gb\|AC... gi\|229357614, gi... - gi\|229505391\|ref\|ZP_04394901.1\| lactoylglutathione lyase [Vibrio cholerae BX 330286], gi\|229357614\|g... gi\|254843845, gi... - gi\|254848140\|ref\|ZP_05237490.1\| lactoylglutathione lyase [Vibrio cholerae MO10], gi\|254843845\|gb\|EET... gi\|229344775, gi... - gi\|229518060\|ref\|ZP_04407504.1\| lactoylglutathione lyase [Vibrio cholerae RC9], gi\|229344775\|gb\|EEO0... gi\|121628268, gi... - gi\|121729982\|ref\|ZP_01682399.1\| lactoylglutathione lyase [Vibrio cholerae V52], gi\|121628268\|gb\|EAX6... gi\|229371065, gi... - gi\|229608410\|ref\|YP_002879058.1\| lactoylglutathione lyase [Vibrio cholerae MJ-1236], gi\|229371065\|gb... LGUL_VIBCH - (Q9KT93) Probable lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxal...	135.0	[0..2]	[128..47]
gi\|237503531, gi... - gi\|237810899\|ref\|YP_002895350.1\| lactoylglutathione lyase (Methylglyoxalase)(Aldoketomutase) (Glyoxa... gi\|76809246, gi\|... - gi\|76809246\|ref\|YP_332289.1\| lactoylglutathione lyase [Burkholderia pseudomallei 1710b], gi\|76578699...	134.0	[0..3]	[129..108]
gi\|53763628, gi\|... - gi\|75906364\|ref\|YP_320660.1\| glyoxalase I [Anabaena variabilis ATCC 29413], gi\|75700089\|gb\|ABA19765....	134.0	[0..5]	[128..1]
gi\|150841188, gi... - gi\|75431428\|ref\|ZP_00733000.1\| Lactoylglutathione lyase [Actinobacillus succinogenes 130Z], gi\|74276...	133.0	[0..5]	[128..1]
gi\|25529923 - pir\|\|AB2096 lactoylglutathione lyase [imported] - Nostoc sp. (strain PCC 7120) gi\|17229813, gi\|... - gi\|17229813\|ref\|NP_486361.1\| lactoylglutathione lyase [Nostoc sp. PCC 7120], gi\|17131413\|dbj\|BAB7402...	132.0	[0..5]	[128..1]
gi\|186466114, gi... - gi\|23128141\|ref\|ZP_00109995.1\| COG0346: Lactoylglutathione lyase and related lyases [Nostoc punctifo...	132.0	[0..5]	[128..1]
gi\|78067502, gi\|... - gi\|78067502\|ref\|YP_370271.1\| glyoxalase I [Burkholderia sp. 383], gi\|77968247\|gb\|ABB09627.1\| Glyoxal...	132.0	[0..5]	[129..1]
gi\|83720549, gi\|... - gi\|83720549\|ref\|YP_441137.1\| lactoylglutathione lyase [Burkholderia thailandensis E264], gi\|83654374... gi\|167617962 - gi\|167617962\|ref\|ZP_02386593.1\| lactoylglutathione lyase [Burkholderia thailandensis Bt4] gi\|167579888 - gi\|167579888\|ref\|ZP_02372762.1\| lactoylglutathione lyase [Burkholderia thailandensis TXDOH]	131.0	[0..5]	[129..1]
gi\|52306810, gi\|... - gi\|52424758\|ref\|YP_087895.1\| GloA protein [Mannheimia succiniciproducens MBEL55E], gi\|52306810\|gb\|AA...	131.0	[0..4]	[128..1]

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Predicted Domain #1

Region A:
Residues: [1-129]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGLKQVHHI AIIATDYAVS KAFYCDILGF TLQSEVYREA RDSWKGDLAL NGQYVIELFS  60
   61 FPFPPERPSR PEACGLRHLA FSVDDIDAAV AHLESHNVKC ETIRVDPYTQ KRFTFFNDPD 120
  121 GLPLELYEQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.69897
Match:	2p25A
Description:	No description for 2p25A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits