YRC Public Data Repository - Protein Structure Prediction

Protein:	YAEH_ECOLI
Organism:	Escherichia coli
Length:	128 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAEH_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|238784875, gi... - gi\|77957685\|ref\|ZP_00821734.1\| COG1196: Chromosome segregation ATPases [Yersinia bercovieri ATCC 439... gi\|77963179 - gi\|77963179\|ref\|ZP_00826991.1\| COG1196: Chromosome segregation ATPases [Yersinia mollaretii ATCC 439...	208.0	[0..1]	[127..1]
YAEH_SALPA - UPF0325 protein YaeH OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=yaeH PE=3 SV=1 YAEH_SALCH - UPF0325 protein YaeH OS=Salmonella choleraesuis (strain SC-B67) GN=yaeH PE=3 SV=1 gi\|214000845 - gi\|214000845\|ref\|ZP_03411580.1\| hypothetical protein Salmonellentericaenterica_09811 [Salmonella ent... gi\|213647545 - gi\|213647545\|ref\|ZP_03377598.1\| hypothetical protein SentesTy_09807 [Salmonella enterica subsp. ente... gi\|213609530 - gi\|213609530\|ref\|ZP_03369356.1\| hypothetical protein SentesTyp_02918 [Salmonella enterica subsp. ent... gi\|213975349 - gi\|213975349\|ref\|ZP_03402608.1\| hypothetical protein Salmonellaentericaenterica_12618 [Salmonella en... gi\|213852251 - gi\|213852251\|ref\|ZP_03381783.1\| hypothetical protein SentesT_04837 [Salmonella enterica subsp. enter... YAEH_SALEP - UPF0325 protein YaeH OS=Salmonella enteritidis PT4 (strain P125109) GN=yaeH PE=3 SV=1 YAEH_SALG2 - UPF0325 protein YaeH OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=yaeH PE=3 SV=1 YAEH_SALTY - UPF0325 protein yaeH OS=Salmonella typhimurium GN=yaeH PE=3 SV=1 YAEH_SALPB - UPF0325 protein yaeH OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=yaeH PE=3 SV=1 gi\|213582935 - gi\|213582935\|ref\|ZP_03364761.1\| hypothetical protein SentesTyph_17678 [Salmonella enterica subsp. en... YAEH_SALCH - UPF0325 protein yaeH OS=Salmonella choleraesuis GN=yaeH PE=3 SV=1 gi\|213425937 - gi\|213425937\|ref\|ZP_03358687.1\| hypothetical protein SentesTyphi_09984 [Salmonella enterica subsp. e... YAEH_SALTY - UPF0325 protein yaeH OS=Salmonella typhimurium GN=yaeH PE=3 SV=1 YAEH_SALTI - UPF0325 protein yaeH OS=Salmonella typhi GN=yaeH PE=3 SV=1 lcl\|NC_016856.1_... - [gene=yaeH] [protein=hypothetical protein] [protein_id=YP_005235882.1] [location=complement(248022..... YAEH_SALPB - UPF0325 protein YaeH OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=yaeH PE=3 SV=1 gi\|16759202 - gi\|16759202\|ref\|NP_454819.1\| hypothetical protein STY0233 [Salmonella enterica subsp. enterica serov... YAEH_SALTY - UPF0325 protein YaeH OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yaeH PE=3 SV... gi\|205331459, gi... - gi\|205331459\|gb\|EDZ18223.1\| protein YaeH [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- s... gi\|29136376, gi\|... - gi\|29140752\|ref\|NP_804094.1\| hypothetical protein t0212 [Salmonella enterica subsp. enterica serovar... gi\|167550584, gi... - gi\|205324401\|gb\|EDZ12240.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Saintpaul str.... YAEH_SALCH - UPF0325 protein yaeH OS=Salmonella choleraesuis GN=yaeH PE=3 SV=1 YAEH_SALPA - UPF0325 protein yaeH OS=Salmonella paratyphi A GN=yaeH PE=3 SV=1 YAEH_SALDC - UPF0325 protein YaeH OS=Salmonella dublin (strain CT_02021853) GN=yaeH PE=3 SV=1 YAEH_SALPK - UPF0325 protein YaeH OS=Salmonella paratyphi A (strain AKU_12601) GN=yaeH PE=3 SV=1 gi\|204927233, gi... - gi\|204927233\|ref\|ZP_03218435.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Javiana st... gi\|199604908, gi... - gi\|200387810\|ref\|ZP_03214422.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Virchow st... YAEH_SALSV - UPF0325 protein YaeH OS=Salmonella schwarzengrund (strain CVM19633) GN=yaeH PE=3 SV=1 gi\|194457314, gi... - gi\|194470950\|ref\|ZP_03076934.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Kentucky s... gi\|197262542, gi... - gi\|197262542\|ref\|ZP_03162616.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Saintpaul ... gi\|238911277 - gi\|238911277\|ref\|ZP_04655114.1\| hypothetical protein SentesTe_09095 [Salmonella enterica subsp. ente... YAEH_SALA4 - UPF0325 protein YaeH OS=Salmonella agona (strain SL483) GN=yaeH PE=3 SV=1 gi\|168820783, gi... - gi\|205342409\|gb\|EDZ29173.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Weltevreden st... gi\|195632708, gi... - gi\|195632708\|gb\|EDX51162.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Newport str. S... YAEH_SALHS - UPF0325 protein YaeH OS=Salmonella heidelberg (strain SL476) GN=yaeH PE=3 SV=1 YAEH_SALNS - UPF0325 protein YaeH OS=Salmonella newport (strain SL254) GN=yaeH PE=3 SV=1 gi\|197291960, gi... - gi\|197291960\|gb\|EDY31310.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Schwarzengrund... YAEH_SALTI - UPF0325 protein YaeH OS=Salmonella typhi GN=yaeH PE=3 SV=1 gi\|168230517, gi... - gi\|205335072\|gb\|EDZ21836.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Kentucky str. ... gi\|205347450, gi... - gi\|205347450\|gb\|EDZ34081.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Hadar str. RI_... gi\|205336159, gi... - gi\|205336159\|gb\|EDZ22923.1\| protein YaeH [Salmonella enterica subsp. enterica serovar Heidelberg str...	208.0	[0..1]	[128..1]
gi\|165939851, gi... - gi\|89105130\|ref\|ZP_01177655.1\| COG1196: Chromosome segregation ATPases [Yersinia pestis biovar Orien... Y514_YERPA - UPF0325 protein YPA_0514 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=YPA_0514 PE=3 SV=1 Y3439_YERPG - UPF0325 protein YpAngola_A3439 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=YpAngola_A3439 PE=3... Y2962_YERPN - UPF0325 protein YPN_2962 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=YPN_2962 PE=3 SV=1 Y1009_YERP3 - UPF0325 protein YpsIP31758_1009 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=Yp... gi\|45442579, gi\|... - gi\|45442579\|ref\|NP_994118.1\| hypothetical protein YP_2811 [Yersinia pestis biovar Microtus str. 9100... gi\|22127017, gi\|... - gi\|22127017\|ref\|NP_670440.1\| hypothetical protein y3141 [Yersinia pestis KIM], gi\|21960064\|gb\|AAM866... gi\|115346819, gi... - gi\|218928208\|ref\|YP_002346083.1\| hypothetical protein YPO1040 [Yersinia pestis CO92], gi\|16121340\|re... Y3007_YERPS - UPF0325 protein YPTB3007 OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=YPTB3007 PE=3... Y3007_YERPS - UPF0325 protein YPTB3007 OS=Yersinia pseudotuberculosis GN=YPTB3007 PE=3 SV=1 gi\|149366959, gi... - gi\|149366959\|ref\|ZP_01888992.1\| hypothetical protein YPE_2223 [Yersinia pestis CA88-4125], gi\|149290... Y1673_YERPP - UPF0325 protein YPDSF_1673 OS=Yersinia pestis (strain Pestoides F) GN=YPDSF_1673 PE=3 SV=1 gi\|165920982, gi... - gi\|165927086\|ref\|ZP_02222918.1\| conserved hypothetical protein [Yersinia pestis biovar Orientalis st... gi\|166207410, gi... - gi\|166211639\|ref\|ZP_02237674.1\| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. ... gi\|166011905, gi... - gi\|166011905\|ref\|ZP_02232803.1\| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. ... gi\|167419810, gi... - gi\|167419810\|ref\|ZP_02311563.1\| conserved hypothetical protein [Yersinia pestis biovar Orientalis st... gi\|167400075, gi... - gi\|167400075\|ref\|ZP_02305593.1\| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. ... gi\|167468858 - gi\|167468858\|ref\|ZP_02333562.1\| hypothetical protein YpesF_13399 [Yersinia pestis FV-1] gi\|167425350, gi... - gi\|167425350\|ref\|ZP_02317103.1\| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis s... gi\|229837747, gi... - gi\|229837747\|ref\|ZP_04457907.1\| conserved protein [Yersinia pestis Pestoides A], gi\|229704124\|gb\|EEO... gi\|229697335, gi... - gi\|229840969\|ref\|ZP_04461128.1\| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2], gi... gi\|229843070, gi... - gi\|229843070\|ref\|ZP_04463220.1\| conserved protein [Yersinia pestis biovar Orientalis str. India 195]... Y1040_YERPE - UPF0325 protein YPO1040/y3141/YP_2811 OS=Yersinia pestis GN=YPO1040 PE=3 SV=1 Y3127_YERPB - UPF0325 protein YPTS_3127 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=YPTS_3127 PE=... Y1062_YERPY - UPF0325 protein YPK_1062 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=YPK_1062 PE=3...	208.0	[0..1]	[126..1]
gi\|77972706, gi\|... - gi\|77972706\|ref\|ZP_00828265.1\| COG1196: Chromosome segregation ATPases [Yersinia frederiksenii ATCC ...	208.0	[0..1]	[126..1]
Y1947_SODGM - UPF0325 protein SG1947 OS=Sodalis glossinidius (strain morsitans) GN=SG1947 PE=3 SV=1	206.0	[0..1]	[128..1]
Y1027_PECAS - UPF0325 protein ECA1027 OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=ECA1027 ... Y1027_ERWCT - UPF0325 protein ECA1027 OS=Erwinia carotovora subsp. atroseptica GN=ECA1027 PE=3 SV=1	206.0	[0..1]	[127..1]
gi\|77977752, gi\|... - gi\|77977752\|ref\|ZP_00833193.1\| COG1196: Chromosome segregation ATPases [Yersinia intermedia ATCC 299...	205.0	[0..1]	[126..1]
Y668_PHOLL - UPF0325 protein plu0668 OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 ... Y668_PHOLL - UPF0325 protein plu0668 OS=Photorhabdus luminescens subsp. laumondii GN=plu0668 PE=3 SV=1	201.0	[0..1]	[128..1]
Y1856_VIBVU, YI5... - (Q8DBG4) Hypothetical UPF0325 protein VV11856, UPF0325 protein VV1_1856 OS=Vibrio vulnificus GN=VV1_... Y2560_VIBVY - UPF0325 protein VV2560 OS=Vibrio vulnificus (strain YJ016) GN=VV2560 PE=3 SV=1 Y1856_VIBVU - UPF0325 protein VV1_1856 OS=Vibrio vulnificus (strain CMCP6) GN=VV1_1856 PE=3 SV=1	193.0	[0..1]	[125..1]
gi\|229519277, gi... - gi\|229519277\|ref\|ZP_04408720.1\| chromosome segregation ATPase [Vibrio cholerae RC9], gi\|229343966\|gb... gi\|229513905, gi... - gi\|229513905\|ref\|ZP_04403367.1\| chromosome segregation ATPase [Vibrio cholerae TMA 21], gi\|229349086... gi\|229369822, gi... - gi\|229607167\|ref\|YP_002877815.1\| chromosome segregation ATPase [Vibrio cholerae MJ-1236], gi\|2293698... gi\|229341134, gi... - gi\|229522209\|ref\|ZP_04411626.1\| chromosome segregation ATPase [Vibrio cholerae TM 11079-80], gi\|2293... gi\|121586181, gi... - gi\|121586181\|ref\|ZP_01675972.1\| conserved hypothetical protein [Vibrio cholerae 2740-80], gi\|1215495... gi\|153217365, gi... - gi\|153217365\|ref\|ZP_01951116.1\| conserved hypothetical protein [Vibrio cholerae 1587], gi\|124113611\|... gi\|121628502, gi... - gi\|121729751\|ref\|ZP_01682190.1\| conserved hypothetical protein [Vibrio cholerae V52], gi\|121628502\|g... gi\|124121449, gi... - gi\|153803006\|ref\|ZP_01957592.1\| conserved hypothetical protein [Vibrio cholerae MZO-3], gi\|124121449... gi\|153221404, gi... - gi\|153221404\|ref\|ZP_01952382.1\| conserved hypothetical protein [Vibrio cholerae MAK 757], gi\|1241197... gi\|126509130, gi... - gi\|153820323\|ref\|ZP_01972990.1\| conserved hypothetical protein [Vibrio cholerae NCTC 8457], gi\|12650... gi\|254845098, gi... - gi\|254849393\|ref\|ZP_05238743.1\| conserved hypothetical protein [Vibrio cholerae MO10], gi\|254845098\|... gi\|9656826, gi\|1... - gi\|9656826\|gb\|AAF95408.1\| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N169... gi\|11280806 - gi\|11280806\|pir\|\|G82097 conserved hypothetical protein VC2264 [imported] - Vibrio cholerae (strain N... gi\|126518835, gi... - gi\|229512142\|ref\|ZP_04401621.1\| chromosome segregation ATPase [Vibrio cholerae B33], gi\|229352107\|gb... gi\|194535836, gi... - gi\|254222921\|ref\|ZP_04916785.1\| conserved hypothetical protein [Vibrio cholerae RC385], gi\|194535836... gi\|153828223, gi... - gi\|153828223\|ref\|ZP_01980890.1\| conserved hypothetical protein [Vibrio cholerae 623-39], gi\|14887631... gi\|147675190, gi... - gi\|227118710\|ref\|YP_002820606.1\| hypothetical protein VC395_2380 [Vibrio cholerae O395], gi\|22701416... gi\|229507663, gi... - gi\|229507663\|ref\|ZP_04397168.1\| chromosome segregation ATPase [Vibrio cholerae BX 330286], gi\|229355... gi\|227010276, gi... - gi\|227082388\|ref\|YP_002810939.1\| hypothetical protein VCM66_2187 [Vibrio cholerae M66-2], gi\|2270102...	192.0	[0..1]	[125..11]

Back

Predicted Domain #1

Region A:
Residues: [1-128]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDNLKSLGI TNPEEIDRYS LRQEANNDIL KIYFQKDKGE FFAKSVKFKY PRQRKTVVAD  60
   61 GVGQGYKEVQ EISPNLRYII DELDQICQRD RSEVDLKRKI LDDLRHLESV VTNKISEIEA 120
  121 DLEKLTRK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits