YRC Public Data Repository - Protein Structure Prediction

Protein:	WZB_ECOLI
Organism:	Escherichia coli
Length:	147 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WZB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|193069271, gi... - gi\|75236257\|ref\|ZP_00720366.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli E110019], gi\|... gi\|75210010, gi\|... - gi\|75210010\|ref\|ZP_00710193.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli B171], gi\|194...	173.0	[0..1]	[146..1]
gi\|110806030, gi... - gi\|110806030\|ref\|YP_689550.1\| tyrosine phosphatase [Shigella flexneri 5 str. 8401], gi\|110615578\|gb\|...	172.0	[0..1]	[147..1]
gi\|218357017, gi... - gi\|218549476\|ref\|YP_002383267.1\| tyrosine phosphatase [Escherichia fergusonii ATCC 35469], gi\|218357... gi\|91072922, gi\|... - gi\|91211348\|ref\|YP_541334.1\| tyrosine phosphatase [Escherichia coli UTI89], gi\|91072922\|gb\|ABE07803....	172.0	[0..1]	[147..1]
gi\|24113445, gi\|... - gi\|24113445\|ref\|NP_707955.1\| tyrosine phosphatase [Shigella flexneri 2a str. 301], gi\|24052473\|gb\|AA... gi\|30041763, gi\|... - gi\|30063510\|ref\|NP_837681.1\| tyrosine phosphatase [Shigella flexneri 2a str. 2457T], gi\|30041763\|gb\|...	172.0	[0..1]	[147..1]
gi\|109157606\|pdb... - Chain A, Structure Of A Protein Tyrosine Phosphatase gi\|109157606 - gi\|109157606\|pdb\|2FEK\|A Chain A, Structure Of A Protein Tyrosine Phosphatase	172.0	[0..1]	[147..21]
gi\|82543437, gi\|... - gi\|82543437\|ref\|YP_407384.1\| tyrosine phosphatase [Shigella boydii Sb227], gi\|81244848\|gb\|ABB65556.1...	171.0	[0..1]	[147..1]
gi\|115513381, gi... - gi\|117624257\|ref\|YP_853170.1\| tyrosine phosphatase [Escherichia coli APEC O1], gi\|115513381\|gb\|ABJ01... gi\|218365709, gi... - gi\|218558940\|ref\|YP_002391853.1\| tyrosine phosphatase [Escherichia coli S88], gi\|218365709\|emb\|CAR03... gi\|226900882, gi... - gi\|237704516\|ref\|ZP_04534997.1\| tyrosine phosphatase [Escherichia sp. 3_2_53FAA], gi\|226900882\|gb\|EE...	171.0	[0..1]	[147..1]
gi\|75514091, gi\|... - gi\|75514091\|ref\|ZP_00736421.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli 53638], gi\|18...	168.0	[0..1]	[147..1]
gi\|86164747, gi\|... - gi\|87120045\|ref\|ZP_01075941.1\| putative protein-tyrosine-phosphatase [Marinomonas sp. MED121], gi\|86...	168.0	[0..1]	[142..1]
WZB_SALTY - Low molecular weight protein-tyrosine-phosphatase wzb OS=Salmonella typhimurium GN=wzb PE=3 SV=1 gi\|200386956, gi... - gi\|200386956\|ref\|ZP_03213568.1\| low molecular weight protein-tyrosine-phosphatase wzb [Salmonella en... gi\|197361911, gi... - gi\|197361911\|ref\|YP_002141548.1\| tyrosine phosphatase [Salmonella enterica subsp. enterica serovar P... gi\|194737610, gi... - gi\|194737610\|ref\|YP_002115206.1\| low molecular weight protein-tyrosine-phosphatase wzb [Salmonella e... WZB_SALTY - Low molecular weight protein-tyrosine-phosphatase Wzb OS=Salmonella typhimurium (strain LT2 / SGSC14... gi\|197290591, gi... - gi\|197290591\|gb\|EDY29946.1\| low molecular weight protein-tyrosine-phosphatase wzb [Salmonella enteri... gi\|205335641, gi... - gi\|205335641\|gb\|EDZ22405.1\| Low molecular weight protein-tyrosine-phosphatase wzb [Salmonella enteri... gi\|238912546 - gi\|238912546\|ref\|ZP_04656383.1\| tyrosine phosphatase [Salmonella enterica subsp. enterica serovar Te... gi\|167991032, gi... - gi\|205330544\|gb\|EDZ17308.1\| Low molecular weight protein-tyrosine-phosphatase wzb [Salmonella enteri... gi\|205324078, gi... - gi\|205324078\|gb\|EDZ11917.1\| low molecular weight protein-tyrosine-phosphatase wzb [Salmonella enteri... gi\|194470360, gi... - gi\|194470360\|ref\|ZP_03076344.1\| Low molecular weight protein-tyrosine-phosphatase wzb [Salmonella en... gi\|194404173, gi... - gi\|194445510\|ref\|YP_002041387.1\| Low molecular weight protein-tyrosine-phosphatase wzb [Salmonella e... gi\|205344683, gi... - gi\|205344683\|gb\|EDZ31447.1\| low molecular weight protein-tyrosine-phosphatase wzb [Salmonella enteri... gi\|168466225, gi... - gi\|195631300\|gb\|EDX49860.1\| Low molecular weight protein-tyrosine-phosphatase wzb [Salmonella enteri... gi\|161362567, gi... - gi\|161613203\|ref\|YP_001587168.1\| tyrosine phosphatase [Salmonella enterica subsp. enterica serovar P... WZB_SALTY - Low molecular weight protein-tyrosine-phosphatase wzb OS=Salmonella typhimurium GN=wzb PE=3 SV=1 gi\|56127239, gi\|... - gi\|56412982\|ref\|YP_150057.1\| tyrosine phosphatase [Salmonella enterica subsp. enterica serovar Parat... lcl\|NC_016856.1_... - [gene=wzb] [protein=tyrosine phosphatase] [protein_id=YP_005238153.1] [location=complement(2252609.....	166.0	[0..1]	[146..1]

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Predicted Domain #1

Region A:
Residues: [1-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNNILVVCV GNICRSPTAE RLLQRYHPEL KVESAGLGAL VGKGADPTAI SVAAEHQLSL  60
   61 EGHCARQISR RLCRNYDLIL TMEKRHIERL CEMAPEMRGK VMLFGHWDNE CEIPDPYRKS 120
  121 RETFAAVYTL LERSARQWAQ ALNAEQV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.39794
Match:	2fekA
Description:	No description for 2fekA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits