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View Structure Prediction Details

Protein: VATG1_BOVIN
Organism: Bos taurus
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VATG1_BOVIN.

Description E-value Query
Range
Subject
Range
gi|109498722 - gi|109498722|ref|XP_001065881.1| PREDICTED: similar to ATPase, H+ transporting, V1 subunit G, isofor...
157.0 [0..1] [117..105]
gi|109149627, gi... - gi|109149627|ref|XP_001084453.1| PREDICTED: similar to vacuolar H+ ATPase G1 [Macaca mulatta], gi|10...
CCDS6807.1_1 - null
140.0 [0..1] [118..1]
VATG1_MOUSE - V-type proton ATPase subunit G 1 OS=Mus musculus GN=Atp6v1g1 PE=1 SV=3
140.0 [0..1] [118..1]
ATP6V1G1 - ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
gi|55632251 - gi|55632251|ref|XP_528400.1| PREDICTED: similar to vacuolar H(+)-ATPase subunit isoform 2 [Pan trogl...
139.0 [0..1] [118..1]
gi|114626332 - gi|114626332|ref|XP_001155506.1| PREDICTED: similar to vacuolar H(+)-ATPase subunit isoform 1 [Pan t...
137.0 [0..1] [118..1]
gi|33585956, gi|... - gi|33585956|gb|AAH56050.1| Atp6v1g1 protein [Xenopus laevis], gi|148231664|ref|NP_001080436.1| ATPas...
135.0 [0..1] [118..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQSQGIQQ LLQAEKRAAE KVSEARKRKN RRLKQAKEEA QAEVEQYRLQ REKEFKAKEA  60
   61 AALGSHGSCS TEVEKDTQEK MTILQTYFQQ NRDEVLDNLL AFVCDIRPEI HENYRING

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.619789
Match: PF03179.6
Description: No description for PF03179.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.953 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.944 N/A N/A a.29.13 Description not found.
View Download 0.932 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.932 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.913 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.856 N/A N/A a.24.22 Description not found.
View Download 0.844 N/A N/A a.59.1 PAH2 domain
View Download 0.779 N/A N/A a.59.1 PAH2 domain
View Download 0.765 N/A N/A a.59.1 PAH2 domain
View Download 0.726 N/A N/A a.133.1 Phospholipase A2, PLA2


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle