| Protein: | TOLB_ECOLI |
| Organism: | Escherichia coli |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOLB_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
391.0 | [0..16] | [428..1271] |
|
|
382.0 | [0..16] | [428..1143] |
|
|
374.0 | [0..12] | [428..664] |
|
|
373.0 | [0..16] | [428..856] |
|
|
372.0 | [0..16] | [428..969] |
|
Region A: Residues: [1-430] |
1 11 21 31 41 51
| | | | | |
1 MKQALRVAFG FLILWASVLH AEVRIVIDSG VDSGRPIGVV PFQWAGPGAA PEDIGGIVAA 60
61 DLRNSGKFNP LDRARLPQQP GSAQEVQPAA WSALGIDAVV VGQVTPNPDG SYNVAYQLVD 120
121 TGGAPGTVLA QNSYKVNKQW LRYAGHTASD EVFEKLTGIK GAFRTRIAYV VQTNGGQFPY 180
181 ELRVSDYDGY NQFVVHRSPQ PLMSPAWSPD GSKLAYVTFE SGRSALVIQT LANGAVRQVA 240
241 SFPRHNGAPA FSPDGSKLAF ALSKTGSLNL YVMDLASGQI RQVTDGRSNN TEPTWFPDSQ 300
301 NLAFTSDQAG RPQVYKVNIN GGAPQRITWE GSQNQDADVS SDGKFMVMVS SNGGQQHIAK 360
361 QDLATGGVQV LSSTFLDETP SLAPNGTMVI YSSSQGMGSV LNLVSTDGRF KARLPATDGQ 420
421 VKFPAWSPYL
|
| Detection Method: |  |
| Confidence: | 87.221849 |
| Match: | 1c5kA |
| Description: | TolB, C-terminal domain; TolB, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.61053807974568 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.08590634519745 | bayes_pls_golite062009 |
