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View Structure Prediction Details

Protein: BBX22_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BBX22_ARATH.

Description E-value Query
Range
Subject
Range
gi|4836873, gi|2... - gi|4836873|gb|AAD30576.1|AC007260_7 Highly similar to rice zinc finger protein [Arabidopsis thaliana...
271.0 [0..1] [299..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS ASSIPKCDIC  60
   61 QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT GI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 2djaA
Description: No description for 2djaA was found.

Predicted Domain #2
Region A:
Residues: [103-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVGLESIDTG PSTKSSPTND DKTMETKPFV QSIPEPQKMA FDHHHHQQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [151-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ SYEYMENNGS  60
   61 SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP QIQSPPTASG LNWPKHFHHH 120
  121 SVFVPDITSS TPYTGSSPNQ RVGKRRRRF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle