YRC Public Data Repository - Protein Structure Prediction

Protein:	SIXA_ECOLI
Organism:	Escherichia coli
Length:	161 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIXA_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|146273747, gi... - gi\|98662370\|dbj\|GAA00697.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476776...	148.0	[0..2]	[155..4]
gi\|15026080, gi\|... - gi\|15896273\|ref\|NP_349622.1\| phosphoglycerate mutase [Clostridium acetobutylicum ATCC 824], gi\|15026... gi\|25331550 - pir\|\|G97271 probable phosphoglycerate mutase [imported] - Clostridium acetobutylicum	141.0	[0..1]	[160..1]
gi\|168229763, gi... - gi\|205335949\|gb\|EDZ22713.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|197289715, gi... - gi\|197289715\|gb\|EDY29078.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|167549605, gi... - gi\|205325374\|gb\|EDZ13213.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|205328826, gi... - gi\|205328826\|gb\|EDZ15590.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|16420931, gi\|... - gi\|16765714\|ref\|NP_461329.1\| phosphohistidine phosphatase [Salmonella typhimurium LT2], gi\|16420931\|... gi\|238912334 - gi\|238912334\|ref\|ZP_04656171.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|224467651, gi... - gi\|224583124\|ref\|YP_002636922.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|62180959, gi\|... - gi\|62180959\|ref\|YP_217376.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica serov... gi\|199604466, gi... - gi\|200387368\|ref\|ZP_03213980.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enteri... gi\|206709608, gi... - gi\|207857805\|ref\|YP_002244456.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|197262936, gi... - gi\|197262936\|ref\|ZP_03163010.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enteri... gi\|198243164, gi... - gi\|198243164\|ref\|YP_002216459.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enter... gi\|194472111, gi... - gi\|194472111\|ref\|ZP_03078095.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enteri... lcl\|NC_016856.1_... - [gene=sixA] [protein=phosphohistidine phosphatase] [protein_id=YP_005238471.1] [location=complement(... gi\|194711784, gi... - gi\|194736282\|ref\|YP_002115456.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enter... gi\|194401646, gi... - gi\|194442983\|ref\|YP_002041651.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enter... gi\|194407427, gi... - gi\|194449123\|ref\|YP_002046442.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|168242514, gi... - gi\|205338524\|gb\|EDZ25288.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s... gi\|168465899, gi... - gi\|195631473\|gb\|EDX50033.1\| phosphohistidine phosphatase SixA [Salmonella enterica subsp. enterica s...	138.0	[0..1]	[161..1]
gi\|197093126, gi... - gi\|197361650\|ref\|YP_002141286.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica s... gi\|56126973, gi\|... - gi\|56412716\|ref\|YP_149791.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica serov...	137.0	[0..1]	[161..1]
gi\|134299758, gi... - gi\|88944800\|ref\|ZP_01148024.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Desulfotomaculum...	137.0	[0..2]	[156..5]
gi\|76588241, gi\|... - gi\|76796379\|ref\|ZP_00778742.1\| Phosphoglycerate/bisphosphoglycerate mutase [Thermoanaerobacter ethan... gi\|241884465, gi... - gi\|241903241\|ref\|ZP_04787968.1\| Phosphoglycerate mutase [Thermoanaerobacter brockii subsp. finnii Ak...	137.0	[0..2]	[156..4]
gi\|213582766 - gi\|213582766\|ref\|ZP_03364592.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|213426189 - gi\|213426189\|ref\|ZP_03358939.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|213160944 - gi\|213160944\|ref\|ZP_03346654.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|214001645 - gi\|214001645\|ref\|ZP_03412380.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|213978050 - gi\|213978050\|ref\|ZP_03405309.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|213852451 - gi\|213852451\|ref\|ZP_03381983.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|213650421 - gi\|213650421\|ref\|ZP_03380474.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica se... gi\|16761311 - gi\|16761311\|ref\|NP_456928.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica serov... gi\|25323596, gi\|... - gi\|25323596\|pir\|\|AI0804 phosphohistidine phosphatase (EC 3.1.3.-) [imported] - Salmonella enterica s... gi\|29140993, gi\|... - gi\|29140993\|ref\|NP_804335.1\| phosphohistidine phosphatase [Salmonella enterica subsp. enterica serov...	137.0	[0..1]	[161..1]
gi\|242231833, gi... - gi\|242256669\|ref\|ZP_04801556.1\| Phosphoglycerate mutase [Thermoanaerobacter sp. X513], gi\|242231833\|... gi\|166854478, gi... - gi\|167040238\|ref\|YP_001663223.1\| phosphoglycerate mutase [Thermoanaerobacter sp. X514], gi\|166854478...	137.0	[0..2]	[156..4]
gi\|217319105, gi... - gi\|217326738\|ref\|ZP_03442821.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. TW1... gi\|209160621, gi... - gi\|209399221\|ref\|YP_002271751.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC... gi\|254593632, gi... - gi\|254794232\|ref\|YP_003079069.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 str. TW14359... gi\|13362693, gi\|... - gi\|15832477\|ref\|NP_311250.1\| hypothetical protein ECs3223 [Escherichia coli O157:H7], gi\|13362693\|db... gi\|13362693, gi\|... - gi\|15832477\|ref\|NP_311250.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|189378895, gi... - gi\|189378895\|gb\|EDU97311.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC508],... gi\|25323598, gi\|... - pir\|\|H85875 hypothetical protein Z3603 [imported] - Escherichia coli (strain O157:H7, substrain EDL... gi\|168787253, gi... - gi\|189372812\|gb\|EDU91228.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC869],... gi\|168780205, gi... - gi\|189001982\|gb\|EDU70968.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4076]... gi\|15802886, gi\|... - gi\|15802886\|ref\|NP_288913.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 EDL933], gi\|1251... gi\|187771163, gi... - gi\|187771163\|gb\|EDU35007.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4196]... gi\|208821380, gi... - gi\|208821380\|ref\|ZP_03261700.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4... gi\|208812458, gi... - gi\|208812458\|ref\|ZP_03253787.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4... gi\|208725472, gi... - gi\|208805671\|ref\|ZP_03248008.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4... gi\|195935721 - gi\|195935721\|ref\|ZP_03081103.1\| phosphohistidine phosphatase [Escherichia coli O157:H7 str. EC4024] gi\|189362926, gi... - gi\|189362926\|gb\|EDU81345.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4486]... gi\|168761216, gi... - gi\|189368280\|gb\|EDU86696.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4501]... gi\|189357667, gi... - gi\|189357667\|gb\|EDU76086.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4401]... gi\|188017351, gi... - gi\|188017351\|gb\|EDU55473.1\| phosphohistidine phosphatase SixA [Escherichia coli O157:H7 str. EC4113]...	133.0	[0..1]	[161..1]
gi\|20807793, gi\|... - gi\|20807793\|ref\|NP_622964.1\| phosphoglycerate mutase/fructose-2,6-bisphosphatase [Thermoanaerobacter... gi\|20807793 - gi\|20807793\|ref\|NP_622964.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Thermoanaerobacter...	133.0	[0..2]	[159..4]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFIMRHGD AALDAASDSV RPLTTNGCDE SRLMANWLKG QKVEIERVLV SPFLRAEQTL  60
   61 EEVGDCLNLP SSAEVLPELT PCGDVGLVSA YLQALTNEGV ASVLVISHLP LVGYLVAELC 120
  121 PGETPPMFTT SAIASVTLDE SGNGTFNWQM SPCNLKMAKA I

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.69897
Match:	1ujbA
Description:	Structure of the protein histidine phosphatase SixA
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits