YRC Public Data Repository - Protein Structure Prediction

Protein:	SAS4_BACME
Organism:	Bacillus megaterium
Length:	69 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAS4_BACME.

Description	E-value	Query Range	Subject Range
gi\|56911410, gi\|... - gi\|56965166\|ref\|YP_176898.1\| small acid-soluble spore protein [Bacillus clausii KSM-K16], gi\|5691141...	103.0	[0..3]	[69..1]
SAS2_BACME - Small, acid-soluble spore protein C2 OS=Bacillus megaterium GN=SASP-C2 PE=3 SV=1	103.0	[0..1]	[68..1]
gi\|89087641, gi\|... - gi\|89097782\|ref\|ZP_01170670.1\| small acid-soluble spore protein [Bacillus sp. NRRL B-14911], gi\|8908...	101.0	[0..3]	[69..1]
gi\|89200450, gi\|... - gi\|89200450\|ref\|ZP_01179203.1\| Small acid-soluble spore protein, alpha/beta type [Bacillus cereus su...	99.0	[0..3]	[68..1]
gi\|3688809 - gi\|3688809\|gb\|AAC62407.1\| SspA [Bacillus firmus]	99.0	[0..3]	[68..1]
gi\|52142406, gi\|... - gi\|52142406\|ref\|YP_084421.1\| small, acid-soluble spore protein [Bacillus cereus E33L], gi\|51975875\|g...	98.0	[0..1]	[66..1]
gi\|42782199, gi\|... - gi\|42782199\|ref\|NP_979446.1\| small, acid-soluble spore protein [Bacillus cereus ATCC 10987], gi\|4273... gi\|228793625, gi... - gi\|228966067\|ref\|ZP_04127131.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228921801, gi... - gi\|228921801\|ref\|ZP_04085116.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228908868, gi... - gi\|228908868\|ref\|ZP_04072699.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis IBL 200]...	98.0	[0..1]	[67..1]
gi\|254760967 - gi\|254760967\|ref\|ZP_05212991.1\| small, acid-soluble spore protein [Bacillus anthracis str. Australia... gi\|254752449 - gi\|254752449\|ref\|ZP_05204485.1\| small, acid-soluble spore protein [Bacillus anthracis str. Vollum] gi\|254742695 - gi\|254742695\|ref\|ZP_05200380.1\| small, acid-soluble spore protein [Bacillus anthracis str. Kruger B] gi\|49185917, gi\|... - gi\|49185917\|ref\|YP_029169.1\| small, acid-soluble spore protein [Bacillus anthracis str. Sterne], gi\|... gi\|164715765, gi... - gi\|165869039\|ref\|ZP_02213699.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0488], g... gi\|254738133 - gi\|254738133\|ref\|ZP_05195836.1\| small, acid-soluble spore protein [Bacillus anthracis str. Western N... gi\|47503569, gi\|... - gi\|47528421\|ref\|YP_019770.1\| small, acid-soluble spore protein [Bacillus anthracis str. 'Ames Ancest... gi\|167631793, gi... - gi\|167631793\|ref\|ZP_02390120.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0442], g... gi\|254723079 - gi\|254723079\|ref\|ZP_05184867.1\| small, acid-soluble spore protein [Bacillus anthracis str. A1055] gi\|30263076, gi\|... - gi\|30263076\|ref\|NP_845453.1\| small, acid-soluble spore protein [Bacillus anthracis str. Ames], gi\|30... gi\|167514792, gi... - gi\|167637285\|ref\|ZP_02395565.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0193], g... gi\|254685668 - gi\|254685668\|ref\|ZP_05149527.1\| small, acid-soluble spore protein [Bacillus anthracis str. CNEVA-906... gi\|170684861, gi... - gi\|170684861\|ref\|ZP_02876086.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0465], g... gi\|229603905, gi... - gi\|229603905\|ref\|YP_002867346.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0248], ... gi\|170129820, gi... - gi\|170704965\|ref\|ZP_02895430.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0389], g... gi\|229139740, gi... - gi\|229139740\|ref\|ZP_04268309.1\| Small, acid-soluble spore protein B [Bacillus cereus BDRD-ST26], gi\|... gi\|172084199, gi... - gi\|177650247\|ref\|ZP_02933248.1\| small, acid-soluble spore protein [Bacillus anthracis str. A0174], g... gi\|228658202, gi... - gi\|229125255\|ref\|ZP_04254359.1\| Small, acid-soluble spore protein B [Bacillus cereus 95/8201], gi\|22... gi\|190564701, gi... - gi\|190564701\|ref\|ZP_03017622.1\| small, acid-soluble spore protein [Bacillus anthracis Tsiankovskii-I... gi\|229030788, gi... - gi\|229030788\|ref\|ZP_04186813.1\| Small, acid-soluble spore protein B [Bacillus cereus AH1271], gi\|228... gi\|227814073, gi... - gi\|227814073\|ref\|YP_002814082.1\| small, acid-soluble spore protein [Bacillus anthracis str. CDC 684]... gi\|225865080, gi... - gi\|225865080\|ref\|YP_002750458.1\| small, acid-soluble spore protein [Bacillus cereus 03BB102], gi\|225... gi\|21401007, gi\|... - gi\|65320385\|ref\|ZP_00393344.1\| hypothetical protein Bant_01003780 [Bacillus anthracis str. A2012], r... gi\|206974485, gi... - gi\|206974485\|ref\|ZP_03235401.1\| small, acid-soluble spore protein [Bacillus cereus H3081.97], gi\|206... gi\|217960541, gi... - gi\|217960541\|ref\|YP_002339103.1\| small, acid-soluble spore protein [Bacillus cereus AH187], gi\|21706... gi\|221240658, gi... - gi\|222096600\|ref\|YP_002530657.1\| small, acid-soluble spore protein [Bacillus cereus Q1], gi\|22124065...	98.0	[0..1]	[67..1]

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Predicted Domain #1

Region A:
Residues: [1-69]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNKSSNNN ELLVYGAEQA IDQMKYEIAS EFGVNLGADT TARANGSVGG EITKRLVQLA  60
   61 EQQLGGGRF

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	36.49485
Match:	PF00269.11
Description:	No description for PF00269.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits