YRC Public Data Repository - Protein Structure Prediction

Protein:	RIMI_ECOLI
Organism:	Escherichia coli
Length:	148 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIMI_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	152.0	[0..2]	[145..4]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	148.0	[0..2]	[145..3]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	141.0	[0..3]	[146..4]
gi\|58425029 - gi\|58425029\|gb\|AAW74066.1\| ribosomal-protein-alanine acetyltransferase [Xanthomonas oryzae pv. oryza...	141.0	[0..4]	[146..158]
gi\|78037674, gi\|... - gi\|78049244\|ref\|YP_365419.1\| putative acetyltransferase [Xanthomonas campestris pv. vesicatoria str....	140.0	[0..2]	[146..10]
gi\|21244288, gi\|... - ref\|NP_643870.1\| ribosomal-protein-alanine acetyltransferase [Xanthomonas axonopodis pv. citri str. ...	140.0	[0..3]	[146..11]
gi\|21111647, gi\|... - ref\|NP_636035.1\| ribosomal-protein-alanine acetyltransferase [Xanthomonas campestris pv. campestris ... gi\|66575224 - gi\|66575224\|gb\|AAY50634.1\| ribosomal-protein-alanine acetyltransferase [Xanthomonas campestris pv. c... gi\|167734867, gi... - gi\|188993107\|ref\|YP_001905117.1\| Putative acetyltransferase [Xanthomonas campestris pv. campestris s...	139.0	[0..4]	[146..12]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	139.0	[0..3]	[146..6]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTISSLETT DLPAAYHIEQ RAHAFPWSEK TFASNQGERY LNFQLTQNGK MAAFAITQVV  60
   61 LDEATLFNIA VDPDYQRQGL GRALLEHLID ELEKRGVATL WLEVRASNAA AIALYESLGF 120
  121 NEATIRRNYY PTTDGREDAI IMALPISM

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.69897
Match:	2cnmA
Description:	No description for 2cnmA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits