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View Structure Prediction Details

Protein: APRR8_ARATH
Organism: Arabidopsis thaliana
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APRR8_ARATH.

Description E-value Query
Range
Subject
Range
gi|28209958, gi|... - gi|28209958|ref|NP_780902.1| transcriptional regulatory protein [Clostridium tetani E88], gi|2820239...
215.0 [0..14] [270..24]

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Predicted Domain #1
Region A:
Residues: [1-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTEETERF SNDICVLLLD SDATCLANLS EMIRKCGYKV VATTRADDLP LIINNKDKKI  60
   61 DLVLAEFRLI EMNKYELLEK IRSICEIPVV VSGAHVKDAI VECLCRGAKL CLEKPLMEND 120
  121 FKILWQFTVS RQRNFRSQID INPPEKNHSI THTQSLGAEL KKNNNNSEVE TEDLDKYKDE 180
  181 LGQGNKRKER ADTDTGEHTE KNNGSDLGDQ KKPKLLFADD LQNETLEAVP NIEEANNERK 240
  241 APTEIKKNGE SSEKKSPELV CMEEELQKWS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 2oqrA
Description: No description for 2oqrA was found.

Predicted Domain #2
Region A:
Residues: [271-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AESFIDLTAS VENESQDPLE SVGDSVGPHE IPLSPPESSN NNVAAQLQMP THEALDEEVM  60
   61 QDGLSLSDLE VDLQEGHGSN KELFDKIFTD LAKELKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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