YRC Public Data Repository - Protein Structure Prediction

Protein:	PGM_ECOLI, PGMU_...
Organism:	Escherichia coli
Length:	546 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGM_ECOLI, PGMU_....

Description	E-value	Query Range	Subject Range
Q667R8\|Q667R8_YERPS - Phosphoglucomutase - Yersinia pseudotuberculosis gi\|51597239, gi\|... - gi\|51597239\|ref\|YP_071430.1\| phosphoglucomutase [Yersinia pseudotuberculosis IP 32953], gi\|51590521\|...	522.0	[0..2]	[546..16]
gi\|229688356, gi... - gi\|229898808\|ref\|ZP_04513953.1\| phosphoglucomutase [Yersinia pestis biovar Orientalis str. India 195... gi\|229901582, gi... - gi\|229901582\|ref\|ZP_04516704.1\| phosphoglucomutase [Yersinia pestis Nepal516], gi\|229681511\|gb\|EEO77... gi\|25292708 - pir\|\|AF0327 phosphoglucomutase (EC 5.4.2.2) [imported] - Yersinia pestis (strain CO92) gi\|115348370, gi... - gi\|218929759\|ref\|YP_002347634.1\| phosphoglucomutase [Yersinia pestis CO92], gi\|16122891\|ref\|NP_40620... gi\|167050867, gi... - gi\|167398363\|ref\|ZP_02303887.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Yersinia pes... gi\|167421280, gi... - gi\|167421280\|ref\|ZP_02313033.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Yersinia pes... gi\|167057879, gi... - gi\|167423709\|ref\|ZP_02315462.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Yersinia pes... gi\|167469453 - gi\|167469453\|ref\|ZP_02334157.1\| phosphoglucomutase [Yersinia pestis FV-1] gi\|162353782, gi... - gi\|162420967\|ref\|YP_001607899.1\| phosphoglucomutase [Yersinia pestis Angola], gi\|162353782\|gb\|ABX877... gi\|229694609, gi... - gi\|229838243\|ref\|ZP_04458402.1\| phosphoglucomutase [Yersinia pestis biovar Orientalis str. PEXU2], g... gi\|165925315, gi... - gi\|165925315\|ref\|ZP_02221147.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Yersinia pes... gi\|229701368, gi... - gi\|229895562\|ref\|ZP_04510733.1\| phosphoglucomutase [Yersinia pestis Pestoides A], gi\|229701368\|gb\|EE... gi\|166008114, gi... - gi\|166008114\|ref\|ZP_02229012.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Yersinia pes... gi\|166212498, gi... - gi\|166212498\|ref\|ZP_02238533.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Yersinia pes...	521.0	[0..1]	[546..1]
gi\|50120275, gi\|... - gi\|50120275\|ref\|YP_049442.1\| phosphoglucomutase [Pectobacterium atrosepticum SCRI1043], gi\|49610801\|...	521.0	[0..1]	[546..1]
gi\|77629957, gi\|... - gi\|77629957\|ref\|ZP_00792543.1\| COG0033: Phosphoglucomutase [Yersinia pseudotuberculosis IP 31758], g...	519.0	[0..2]	[546..4]
gi\|22125158, gi\|... - gi\|22125158\|ref\|NP_668581.1\| phosphoglucomutase [Yersinia pestis KIM], gi\|21958019\|gb\|AAM84832.1\|AE0... gi\|45437135, gi\|... - gi\|45442271\|ref\|NP_993810.1\| phosphoglucomutase [Yersinia pestis biovar Microtus str. 91001], gi\|454... gi\|149291836, gi... - gi\|149365423\|ref\|ZP_01887458.1\| phosphoglucomutase [Yersinia pestis CA88-4125], gi\|149291836\|gb\|EDM4... gi\|145210567, gi... - gi\|145598871\|ref\|YP_001162947.1\| phosphoglucomutase [Yersinia pestis Pestoides F], gi\|145210567\|gb\|A... gi\|108780321, gi... - gi\|108808408\|ref\|YP_652324.1\| phosphoglucomutase [Yersinia pestis Antiqua], gi\|108780321\|gb\|ABG14379... gi\|108811334, gi... - gi\|108811334\|ref\|YP_647101.1\| phosphoglucomutase [Yersinia pestis Nepal516], gi\|108774982\|gb\|ABG1750...	518.0	[0..2]	[546..16]
gi\|77635006 - gi\|77635006\|ref\|ZP_00797096.1\| COG0033: Phosphoglucomutase [Yersinia pestis Angola]	517.0	[0..2]	[546..4]
gi\|77973067, gi\|... - gi\|77973067\|ref\|ZP_00828620.1\| COG0033: Phosphoglucomutase [Yersinia frederiksenii ATCC 33641], gi\|2...	515.0	[0..2]	[546..4]
gi\|254229713, gi... - gi\|75854804\|ref\|ZP_00762477.1\| COG0033: Phosphoglucomutase [Vibrio sp. Ex25], gi\|254229713\|ref\|ZP_04...	514.0	[0..1]	[546..4]
gi\|194404605, gi... - gi\|194445942\|ref\|YP_002039936.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Salmonella ... gi\|16764068, gi\|... - gi\|16764068\|ref\|NP_459683.1\| phosphoglucomutase [Salmonella typhimurium LT2], gi\|16419206\|gb\|AAL1964... gi\|197265193, gi... - gi\|197265193\|ref\|ZP_03165267.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Salmonella e... gi\|205328892, gi... - gi\|205328892\|gb\|EDZ15656.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Salmonella enter... gi\|168264310, gi... - gi\|205347189\|gb\|EDZ33820.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Salmonella enter... lcl\|NC_016856.1_... - [gene=pgm] [protein=phosphoglucomutase] [protein_id=YP_005236415.1] [location=760255..761895] gi\|205322562, gi... - gi\|205322562\|gb\|EDZ10401.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Salmonella enter...	514.0	[0..1]	[546..1]
gi\|28805825, gi\|... - gi\|28897613\|ref\|NP_797218.1\| phosphoglucomutase [Vibrio parahaemolyticus RIMD 2210633], gi\|28805825\|... gi\|28805825 - gi\|28805825\|dbj\|BAC59102.1\| phosphoglucomutase [Vibrio parahaemolyticus RIMD 2210633] gi\|149748012, gi... - gi\|153838594\|ref\|ZP_01991261.1\| phosphoglucomutase, alpha-D-glucose phosphate-specific [Vibrio parah...	514.0	[0..1]	[546..1]

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Predicted Domain #1

Region A:
Residues: [1-546]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIHNRAGQP AQQSDLINVA QLTAQYYVLK PEAGNAEHAV KFGTSGHRGS AARHSFNEPH  60
   61 ILAIAQAIAE ERAKNGITGP CYVGKDTHAL SEPAFISVLE VLAANGVDVI VQENNGFTPT 120
  121 PAVSNAILVH NKKGGPLADG IVITPSHNPP EDGGIKYNPP NGGPADTNVT KVVEDRANAL 180
  181 LADGLKGVKR ISLDEAMASG HVKEQDLVQP FVEGLADIVD MAAIQKAGLT LGVDPLGGSG 240
  241 IEYWKRIGEY YNLNLTIVND QVDQTFRFMH LDKDGAIRMD CSSECAMAGL LALRDKFDLA 300
  301 FANDPDYDRH GIVTPAGLMN PNHYLAVAIN YLFQHRPQWG KDVAVGKTLV SSAMIDRVVN 360
  361 DLGRKLVEVP VGFKWFVDGL FDGSFGFGGE ESAGASFLRF DGTPWSTDKD GIIMCLLAAE 420
  421 ITAVTGKNPQ EHYNELAKRF GAPSYNRLQA AATSAQKAAL SKLSPEMVSA STLAGDPITA 480
  481 RLTAAPGNGA SIGGLKVMTD NGWFAARPSG TEDAYKIYCE SFLGEEHRKQ IEKEAVEIVS 540
  541 EVLKNA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	146.0
Match:	2fuvA
Description:	Phosphoglucomutase from Salmonella typhimurium.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits