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View Structure Prediction Details

Protein: Oda-PA
Organism: Drosophila melanogaster
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Oda-PA.

Description E-value Query
Range
Subject
Range
gi|9295421 - gi|9295421|gb|AAF86963.1| ornithine decarboxylase antizyme [Trachemys scripta elegans]
280.0 [0..5] [253..2]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSNMNNKLD PVFSSGFVRR EFNDSGIADG KLRTISTSSC ATTMSSESYR ISLGVGPLWW  60
   61 SDVPVHHRTD HD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RASLLTGYSR KSSVDSAGGS LYEASSRASS LSSSQSDCSD LESQPDIHSL CSDDDCQEVL  60
   61 RQILQHDQPV QITIKLHVTE DQYTNWNTIL NPVNNLLYVA LPKDLPPAGS KQTFISLLEF 120
  121 AEEKLEVDGI VMVMPKDQPD RARLIEAFLF MGFEPLSRKA PQAPPAAIND NENYYFLYSI 180
  181 EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1zo0A
Description: NMR structure of antizyme isoform 1 from rat
Matching Structure (courtesy of the PDB):

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