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View Structure Prediction Details

Protein: mt:ND4L-PA
Organism: Drosophila melanogaster
Length: 96 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mt:ND4L-PA.

Description E-value Query
Range
Subject
Range
gi|71658045, gi|... - gi|71658045|ref|YP_271997.1| NADH dehydrogenase subunit 4L [Cobitis sinensis], gi|44887484|gb|AAS480...
98.0 [0..3] [96..1]
gi|62184461, gi|... - gi|62184461|ref|YP_220610.1| NADH dehydrogenase subunit 4L [Salanx ariakensis], gi|58430882|dbj|BAD8...
97.0 [0..3] [96..1]
gi|16357046, gi|... - gi|16357046|ref|NP_443601.1| NADH dehydrogenase subunit 4L [Beryx splendens], gi|16267159|dbj|BAB702...
97.0 [0..3] [96..1]
gi|16266812, gi|... - gi|16357117|ref|NP_443484.1| NADH dehydrogenase subunit 4L [Ijimaia dofleini], gi|16266812|dbj|BAB70...
97.0 [0..3] [96..1]
gi|28894761, gi|... - gi|28894761|ref|NP_795841.1| NADH dehydrogenase subunit 4L [Salangichthys microdon], gi|28804963|dbj...
96.0 [0..3] [96..1]
gi|25057508, gi|... - gi|25057508|ref|NP_739680.1| NADH dehydrogenase subunit 4L [Diplacanthopoma brachysoma], gi|25005560...
96.0 [0..3] [96..1]
gi|157056690, gi... - gi|157056718|gb|ABV02310.1| NADH dehydrogenase subunit 4L [Plecoglossus altivelis], gi|157056704|gb|...
96.0 [0..3] [96..1]
gi|108767389, gi... - gi|108767389|ref|YP_636130.1| NADH dehydrogenase subunit 4L [Percina macrolepida], gi|105873662|gb|A...
96.0 [0..3] [96..1]
gi|16357060, gi|... - gi|16357060|ref|NP_443575.1|ND4L_15834 NADH dehydrogenase subunit 4L [Rondeletia loricata], gi|16267...
96.0 [0..3] [96..1]
gi|88061947 - gi|88061947|gb|ABD38952.1| NADH dehydrogenase subunit 4L [Leiostomus xanthurus]
96.0 [0..3] [96..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMILYWSLP MILFILGLFC FVSNRKHLLS MLLSLEFIVL MLFFMLFIYL NMLNYESYFS  60
   61 MMFLTFSVCE GALGLSILVS MIRTHGNDYF QSFSIM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.677781
Match: PF00420.15
Description: No description for PF00420.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.993 N/A N/A a.47.2 t-snare proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle