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View Structure Prediction Details

Protein: rrt-1
Organism: Caenorhabditis elegans
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rrt-1.

Description E-value Query
Range
Subject
Range
rrt-1 - arginyl tRNA synthetase status:Confirmed UniProt:Q19825 protein_id:AAA91224.2
169.0 [0..1] [106..1]
gi|187025216, gi... - gi|39591721|emb|CAE71299.1| Hypothetical protein CBG18188 [Caenorhabditis briggsae], gi|187025216|em...
gi|157775475 - gi|157775475|ref|XP_001665803.1| hypothetical protein CBG18188 [Caenorhabditis briggsae AF16]
167.0 [0..1] [105..1]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANKELQQG YSDYSAASDQ AALLNRLITA MQKGELTDEL LEHIPELGDA KKLNDKLKYR  60
   61 KSILEKSIAE QAAKNKKNGV KATSTSSPSS STSAPAEKKA KKDGKTCV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle