YRC Public Data Repository - Protein Structure Prediction

Protein:	KDSC_ECOLI
Organism:	Escherichia coli
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KDSC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|77973408, gi\|... - gi\|77973408\|ref\|ZP_00828956.1\| COG1778: Low specificity phosphatase (HAD superfamily) [Yersinia fred...	167.0	[0..1]	[188..1]
gi\|36787325, gi\|... - gi\|37527889\|ref\|NP_931234.1\| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [Photorhabdus lumi...	165.0	[0..6]	[188..5]
gi\|238719880, gi... - gi\|77963477\|ref\|ZP_00827286.1\| COG1778: Low specificity phosphatase (HAD superfamily) [Yersinia moll...	165.0	[0..6]	[188..5]
gi\|84387811, gi\|... - gi\|84387811\|ref\|ZP_00990826.1\| low specificity phosphatase [Vibrio splendidus 12B01], gi\|84377326\|gb...	165.0	[0..1]	[188..1]
gi\|238713988, gi... - gi\|77957477\|ref\|ZP_00821532.1\| COG1778: Low specificity phosphatase (HAD superfamily) [Yersinia berc...	165.0	[0..1]	[188..1]
gi\|109692190 - gi\|109692190\|gb\|ABG37982.1\| KdsC [Alkalimonas amylolytica]	165.0	[0..12]	[187..9]
gi\|85058181, gi\|... - gi\|85058181\|ref\|YP_453883.1\| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [Sodalis glossinid...	164.0	[0..1]	[188..1]
gi\|68515775, gi\|... - gi\|68546361\|ref\|ZP_00585908.1\| HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI [Shewanell...	163.0	[0..9]	[188..3]
gi\|119864307, gi... - gi\|119945703\|ref\|YP_943383.1\| heavy metal translocating P-type ATPase [Psychromonas ingrahamii 37], ...	163.0	[0..5]	[187..581]
gi\|50119252, gi\|... - gi\|50119252\|ref\|YP_048419.1\| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [Pectobacterium at...	163.0	[0..1]	[188..1]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKAGASLAT CYGPVSADVI AKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY  60
   61 GIRCALTSDI EVAIITGRKA KLVEDRCATL GITHLYQGQS NKLIAFSDLL EKLAIAPENV 120
  121 AYVGDDLIDW PVMEKVGLSV AVADAHPLLI PRADYVTRIA GGRGAVREVC DLLLLAQGKL 180
  181 DEAKGQSI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.30103
Match:	2p9jA
Description:	No description for 2p9jA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits