YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CaMKII-PI, CaMKII-PD
Organism: Drosophila melanogaster
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CaMKII-PI, CaMKII-PD.

Description E-value Query
Range
Subject
Range
gi|73952969, gi|... - gi|73952975|ref|XP_863150.1| PREDICTED: similar to calcium/calmodulin-dependent protein kinase II ga...
gi|18448917 - gi|18448917|gb|AAL69955.1| CaM kinase II gamma B [Mustela putorius furo]
gi|1657458 - gi|1657458|gb|AAC48711.1| calcium/calmodulin-dependent protein kinase II isoform gamma-B [Sus scrofa...
gi|26667199, gi|... - gi|422769|pir||B46619 Ca2+/calmodulin-dependent protein kinase (EC 2.7.1.123) II gamma chain, splice...
gi|85362742, gi|... - gi|85362742|ref|NP_001034227.1| calcium/calmodulin-dependent protein kinase II gamma isoform 2 [Mus ...
531.0 [0..1] [519..1]

Back

Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAACTRF SDNYDIKEEL GKGAFSIVKR CVQKSTGFEF AAKIINTKKL TARDFQKLER  60
   61 EARICRKLHH PNIVRLHDSI QEENYHYLVF DLVTGGELFE DIVAREFYSE ADASHCIQQI 120
  121 LESVNHCHQN GVVHRDLKPE NLLLASKAKG AAVKLADFGL AIEVQGDHQA WFGFAGTPGY 180
  181 LSPEVLKKEP YGKSVDIWAC GVILYILLVG YPPFWDEDQH RLYSQIKAGA YDYPSPEWDT 240
  241 VTPEAKNLIN QMLTVNPNKR ITAAEALKHP WICQRERVAS VVHRQETVDC LKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.0
Match: 2v7oA
Description: No description for 2v7oA was found.

Predicted Domain #2
Region A:
Residues: [294-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNARRKLKGA ILTTMLATRN FSSRSMITKK GEGSQVKEST DSSSTTLEDD DIKEDKKGTV  60
   61 DRSTTVVSKE PEDIRILCPA KTYQQNIGNS QCSSARRQEI IKITEQLIEA INSGDFDGYT 120
  121 KICDPHLTAF EPEALGNLVE GIDFHKFYFE NVLGKNCKAI NTTILNPHVH LL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [466-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEEAACIAYV RLTQYIDKQG HAHTHQSEET RVWHKRDNKW QNVHFHRSAS AKISGATTFD  60
   61 FIPQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 2ux0A
Description: No description for 2ux0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle