YRC Public Data Repository - Protein Structure Prediction

Protein:	IMM3_ECOLI
Organism:	Escherichia coli
Length:	84 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMM3_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|165932235 - gi\|165932235\|dbj\|BAF99005.1\| colicin E3 immunity protein [Positive selection vector pTCS] gi\|144400 - gi\|144400\|gb\|AAA98285.1\| immunity protein 2 [Plasmid ColE3-CA38] IMM3_ECOLX - Colicin-E3 immunity protein OS=Escherichia coli GN=imm PE=1 SV=3	148.0	[0..1]	[84..2]
gi\|144396 - gi\|144396\|gb\|AAA23081.1\| immunity protein E6	147.0	[0..1]	[84..2]
gi\|6176539 - gi\|6176539\|gb\|AAF05609.1\|AF190857_2 Cim [Klebsiella pneumoniae]	146.0	[0..1]	[84..2]

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Predicted Domain #1

Region A:
Residues: [1-84]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLKLDLTWFD KSTEDFKGEE YSKDFGDDGS VMESLGVPFK DNVNNGCFDV IAEWVPLLQP  60
   61 YFNHQIDISD NEYFVSFDYR DGDW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.30103
Match:	1e44A
Description:	Colicin E3 immunity protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits