YRC Public Data Repository - Protein Structure Prediction

Protein:	ILVN_ECOLI
Organism:	Escherichia coli
Length:	96 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVN_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|23127611, gi\|... - gi\|23127611\|ref\|ZP_00109476.1\| COG0440: Acetolactate synthase, small (regulatory) subunit [Nostoc pu...	122.0	[0..7]	[94..1]
gi\|7436727 - gi\|7436727\|pir\|\|S74358 acetolactate synthase ilvN - Synechocystis sp. (strain PCC 6803) gi\|16331478, gi\|... - gi\|16331478\|ref\|NP_442206.1\| acetolactate synthase 3 regulatory subunit [Synechocystis sp. PCC 6803]...	121.0	[0..5]	[93..15]
gi\|67921725, gi\|... - gi\|67921725\|ref\|ZP_00515242.1\| Acetolactate synthase, small subunit [Crocosphaera watsonii WH 8501],...	121.0	[0..7]	[94..1]
gi\|134298160, gi... - gi\|88944098\|ref\|ZP_01147431.1\| Acetolactate synthase, small subunit [Desulfotomaculum reducens MI-1]...	121.0	[0..7]	[93..1]
gi\|86556992, gi\|... - gi\|86608450\|ref\|YP_477212.1\| acetolactate synthase 3 regulatory subunit [Synechococcus sp. JA-2-3B'a... gi\|86608450 - gi\|86608450\|ref\|YP_477212.1\| acetolactate synthase, small subunit [Cyanobacteria bacterium Yellowsto...	121.0	[0..7]	[93..1]
gi\|71741371, gi\|... - gi\|71838145\|ref\|ZP_00677906.1\| Acetolactate synthase, small subunit [Pelobacter propionicus DSM 2379...	120.0	[0..4]	[93..18]
gi\|33640895, gi\|... - gi\|33863446\|ref\|NP_895006.1\| acetolactate synthase 3 regulatory subunit [Prochlorococcus marinus str...	119.0	[0..7]	[94..1]
gi\|86606770 - gi\|86606770\|ref\|YP_475533.1\| acetolactate synthase, small subunit [Cyanobacteria bacterium Yellowsto... gi\|86606770, gi\|... - gi\|86606770\|ref\|YP_475533.1\| acetolactate synthase 3 regulatory subunit [Synechococcus sp. JA-3-3Ab]...	119.0	[0..7]	[93..1]
gi\|39997008, gi\|... - gi\|39997008\|ref\|NP_952959.1\| acetolactate synthase 3 regulatory subunit [Geobacter sulfurreducens PC...	119.0	[0..7]	[93..1]
gi\|25291333 - pir\|\|AC2384 acetolactate synthase [imported] - Nostoc sp. (strain PCC 7120) gi\|17232119, gi\|... - gi\|17232119\|ref\|NP_488667.1\| acetolactate synthase 3 regulatory subunit [Nostoc sp. PCC 7120], gi\|17... gi\|75701981, gi\|... - gi\|75908256\|ref\|YP_322552.1\| acetolactate synthase 3 regulatory subunit [Anabaena variabilis ATCC 29...	118.0	[0..6]	[94..9]

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Predicted Domain #1

Region A:
Residues: [1-96]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNTTHDNVI LELTVRNHPG VMTHVCGLFA RRAFNVEGIL CLPIQDSDKS HIWLLVNDDQ  60
   61 RLEQMISQID KLEDVVKVQR NQSDPTMFNK IAVFFQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.69897
Match:	2pc6A
Description:	No description for 2pc6A was found.

Predicted functions:

Term	Confidence	Notes
acetolactate synthase activity	14.1096734416761	bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups	12.4176994384119	bayes_pls_golite062009
catalytic activity	0.645256181736122	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: