Protein: | HOFQ_ECOLI |
Organism: | Escherichia coli |
Length: | 412 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOFQ_ECOLI.
Description | E-value | Query Range |
Subject Range |
|
328.0 | [0..1] | [412..1] |
|
327.0 | [0..1] | [412..1] |
|
327.0 | [0..1] | [412..1] |
|
327.0 | [0..1] | [412..1] |
|
326.0 | [0..1] | [412..1] |
|
325.0 | [0..1] | [412..1] |
|
315.0 | [0..1] | [412..1] |
|
315.0 | [0..1] | [412..1] |
|
314.0 | [0..1] | [412..1] |
|
312.0 | [0..1] | [412..1] |
Region A: Residues: [1-78] |
1 11 21 31 41 51 | | | | | | 1 MKQWIAALLL MLIPGVQAAK PQKVTLMVDD VPVAQVLQAL AEQEKLNLVV SPDVSGTVSL 60 61 HLTDVPWKQA LQTVVKSA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.766 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
View | Download | 0.597 | N/A | N/A | d.95.2 | Homing endonucleases |
View | Download | 0.576 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
View | Download | 0.496 | N/A | N/A | d.95.2 | Homing endonucleases |
View | Download | 0.486 | N/A | N/A | d.58.11 | EF-G/eEF-2 domains III and V |
Region A: Residues: [79-181] |
1 11 21 31 41 51 | | | | | | 1 GLITRQEGNI LSVHSIAWQN NNIARQEAEQ ARAQANLPLE NRSITLQYAD AGELAKAGEK 60 61 LLSAKGSMTV DKRTNRLLLR DNKTALSALE QWVAQMDLPV GQV |
Detection Method: | |
Confidence: | 10.387216 |
Match: | PF03958.8 |
Description: | No description for PF03958.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.609 | 0.110 | protein secretion | c.30.1 | PreATP-grasp domain |
View | Download | 0.734 | 0.106 | protein secretion | d.58.3 | Protease propeptides/inhibitors |
View | Download | 0.634 | 0.023 | protein secretion | c.78.2 | Aspartate/glutamate racemase |
View | Download | 0.617 | N/A | N/A | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
View | Download | 0.610 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
Region A: Residues: [182-412] |
1 11 21 31 41 51 | | | | | | 1 ELSAHIVTIN EKSLRELGVK WTLADAQHAG GVGQVTTLGS DLSVATATTH VGFNIGRING 60 61 RLLDLELSAL EQKQQLDIIA SPRLLASHLQ PASIKQGSEI PYQVSSGESG ATSVEFKEAV 120 121 LGMEVTPTVL QKGRIRLKLH ISQNVPGQVL QQADGEVLAI DKQEIETQVE VKSGETLALG 180 181 GIFTRKNKSG QDSVPLLGDI PWFGQLFRHD GKEDERRELV VFITPRLVSS E |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.