YRC Public Data Repository - Protein Structure Prediction

Protein:	GUN_ECOLI
Organism:	Escherichia coli
Length:	368 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUN_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|91213037, gi\|... - gi\|91213037\|ref\|YP_543023.1\| endo-1,4-D-glucanase [Escherichia coli UTI89], gi\|91074611\|gb\|ABE09492.... gi\|191170544, gi... - gi\|191170544\|ref\|ZP_03032097.1\| cellulase [Escherichia coli F11], gi\|190909352\|gb\|EDV68938.1\| cellul... gi\|26110594, gi\|... - gi\|26250165\|ref\|NP_756205.1\| endo-1,4-D-glucanase [Escherichia coli CFT073], gi\|26110594\|gb\|AAN82779...	455.0	[0..1]	[368..3]
gi\|110345370, gi... - gi\|110643778\|ref\|YP_671508.1\| endo-1,4-D-glucanase [Escherichia coli 536], gi\|110345370\|gb\|ABG71607.... gi\|237703301, gi... - gi\|237703301\|ref\|ZP_04533782.1\| endo-1,4-D-glucanase BcsZ [Escherichia sp. 3_2_53FAA], gi\|226902565\|... gi\|115514938, gi... - gi\|117625814\|ref\|YP_859137.1\| endo-1,4-D-glucanase [Escherichia coli APEC O1], gi\|115514938\|gb\|ABJ03... gi\|227883692, gi... - gi\|227883692\|ref\|ZP_04001497.1\| cellulase [Escherichia coli 83972], gi\|227839272\|gb\|EEJ49738.1\| cell... gi\|218691815, gi... - gi\|218691815\|ref\|YP_002400027.1\| endo-1,4-D-glucanase [Escherichia coli ED1a], gi\|218429379\|emb\|CAR1... gi\|75242677 - gi\|75242677\|ref\|ZP_00726421.1\| COG3405: Endoglucanase Y [Escherichia coli F11] gi\|218560607, gi... - gi\|218560607\|ref\|YP_002393520.1\| endo-1,4-D-glucanase [Escherichia coli S88], gi\|218367376\|emb\|CAR05...	455.0	[0..1]	[368..1]
gi\|75179838 - gi\|75179838\|ref\|ZP_00699825.1\| COG3405: Endoglucanase Y [Shigella boydii BS512]	455.0	[0..1]	[368..1]
gi\|242379049, gi... - gi\|251786776\|ref\|YP_003001080.1\| hypothetical protein B21_03332 [Escherichia coli BL21], gi\|24237904... gi\|218556082, gi... - gi\|218556082\|ref\|YP_002388995.1\| endo-1,4-D-glucanase [Escherichia coli IAI1], gi\|218362850\|emb\|CAR0... gi\|254163453, gi... - gi\|254163453\|ref\|YP_003046561.1\| endo-1,4-D-glucanase [Escherichia coli B str. REL606], gi\|253975354... gi\|75516008 - gi\|75516008\|ref\|ZP_00738126.1\| COG3405: Endoglucanase Y [Escherichia coli 53638] gi\|253322682, gi... - gi\|254290203\|ref\|YP_003055951.1\| endo-1,4-D-glucanase [Escherichia coli BL21(DE3)], gi\|253979510\|gb\|... gi\|83588614 - gi\|83588614\|ref\|ZP_00927238.1\| COG3405: Endoglucanase Y [Escherichia coli 101-1] gi\|83571340 - gi\|83571340\|ref\|ZP_00922780.1\| COG3405: Endoglucanase Y [Shigella dysenteriae 1012]	454.0	[0..1]	[368..1]
gi\|15804074, gi\|... - gi\|15804074\|ref\|NP_290111.1\| endo-1,4-D-glucanase [Escherichia coli O157:H7 EDL933], gi\|12518250\|gb\|... gi\|15833665, gi\|... - gi\|15833665\|ref\|NP_312438.1\| endo-1,4-D-glucanase [Escherichia coli O157:H7 str. Sakai], gi\|13363885... gi\|168759616, gi... - gi\|189369779\|gb\|EDU88195.1\| cellulase [Escherichia coli O157:H7 str. EC4501], gi\|168759616\|ref\|ZP_02... gi\|209755424, gi... - pir\|\|E86026 probable endoglucanase yhjM [imported] - Escherichia coli (strain O157:H7, substrain ED... gi\|195935059 - gi\|195935059\|ref\|ZP_03080441.1\| endo-1,4-D-glucanase [Escherichia coli O157:H7 str. EC4024] gi\|218707164, gi... - gi\|218707164\|ref\|YP_002414683.1\| endo-1,4-D-glucanase [Escherichia coli UMN026], gi\|218434261\|emb\|CA... GUN_ECO57 - Endoglucanase OS=Escherichia coli O157:H7 GN=bcsZ PE=3 SV=1 gi\|254795484, gi... - gi\|254795484\|ref\|YP_003080321.1\| endo-1,4-D-glucanase [Escherichia coli O157:H7 str. TW14359], gi\|25...	453.0	[0..1]	[368..1]
gi\|75188296 - gi\|75188296\|ref\|ZP_00701563.1\| COG3405: Endoglucanase Y [Escherichia coli E24377A] gi\|209914250, gi... - gi\|209920991\|ref\|YP_002295075.1\| endo-1,4-D-glucanase [Escherichia coli SE11], gi\|209914250\|dbj\|BAG7... gi\|75260184 - gi\|75260184\|ref\|ZP_00731452.1\| COG3405: Endoglucanase Y [Escherichia coli E22] gi\|75237469 - gi\|75237469\|ref\|ZP_00721502.1\| COG3405: Endoglucanase Y [Escherichia coli E110019] gi\|75231623 - gi\|75231623\|ref\|ZP_00717981.1\| COG3405: Endoglucanase Y [Escherichia coli B7A] gi\|75210076 - gi\|75210076\|ref\|ZP_00710255.1\| COG3405: Endoglucanase Y [Escherichia coli B171] gi\|218353973, gi... - gi\|218697241\|ref\|YP_002404908.1\| endo-1,4-D-glucanase [Escherichia coli 55989], gi\|218353973\|emb\|CAV...	453.0	[0..1]	[368..1]
gi\|30065188, gi\|... - gi\|30065188\|ref\|NP_839359.1\| endo-1,4-D-glucanase [Shigella flexneri 2a str. 2457T], gi\|30043450\|gb\|... gi\|110807374, gi... - gi\|110807374\|ref\|YP_690894.1\| endo-1,4-D-glucanase [Shigella flexneri 5 str. 8401], gi\|110616922\|gb\|...	452.0	[0..1]	[368..1]
gi\|81247306, gi\|... - gi\|82545895\|ref\|YP_409842.1\| endo-1,4-D-glucanase [Shigella boydii Sb227], gi\|81247306\|gb\|ABB68014.1...	451.0	[0..1]	[368..1]
gi\|74314216, gi\|... - gi\|74314216\|ref\|YP_312635.1\| endo-1,4-D-glucanase [Shigella sonnei Ss046], gi\|73857693\|gb\|AAZ90400.1...	448.0	[0..1]	[368..1]
gi\|56129776, gi\|... - gi\|56415519\|ref\|YP_152594.1\| endo-1,4-D-glucanase [Salmonella enterica subsp. enterica serovar Parat...	440.0	[0..1]	[367..2]

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Predicted Domain #1

Region A:
Residues: [1-368]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLRSGIVT MLLLAAFSVQ AACTWPAWEQ FKKDYISQEG RVIDPSDARK ITTSEGQSYG  60
   61 MFSALAANDR AAFDNILDWT QNNLAQGSLK ERLPAWLWGK KENSKWEVLD SNSASDGDVW 120
  121 MAWSLLEAGR LWKEQRYTDI GSALLKRIAR EEVVTVPGLG SMLLPGKVGF AEDNSWRFNP 180
  181 SYLPPTLAQY FTRFGAPWTT LRETNQRLLL ETAPKGFSPD WVRYEKDKGW QLKAEKTLIS 240
  241 SYDAIRVYMW VGMMPDSDPQ KARMLNRFKP MATFTEKNGY PPEKVDVATG KAQGKGPVGF 300
  301 SAAMLPFLQN RDAQAVQRQR VADNFPGSDA YYNYVLTLFG QGWDQHRFRF STKGELLPDW 360
  361 GQECANSH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	77.522879
Match:	1wzzA
Description:	No description for 1wzzA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.632799902740898	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: