YRC Public Data Repository - Protein Structure Prediction

Protein:	GST_ECOLI, GT_ECOLI
Organism:	Escherichia coli
Length:	201 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GST_ECOLI, GT_ECOLI.

Description	E-value	Query Range	Subject Range
gst2 - gst2 putative glutathionine S-transferase 917708:918319 reverse MW:22159	199.0	[0..1]	[200..1]
gi\|115365402, gi... - gi\|115377601\|ref\|ZP_01464798.1\| glutathione S-transferase [Stigmatella aurantiaca DW4/3-1], gi\|11536...	195.0	[0..1]	[200..1]
gi\|53756476, gi\|... - gi\|53802715\|ref\|YP_112614.1\| glutathione S-transferase [Methylococcus capsulatus str. Bath], gi\|5375...	193.0	[0..1]	[200..1]
gi\|86751701, gi\|... - gi\|86751701\|ref\|YP_488197.1\| glutathione S-transferase-like protein [Rhodopseudomonas palustris HaA2...	192.0	[0..1]	[200..1]
gi\|193789009 - gi\|193789009\|gb\|ACF20641.1\| glutathione s-transferase [Achromobacter sp. BP3] gi\|520921 - gi\|520921\|emb\|CAA54033.1\| glutathione S-transferase [Pseudomonas sp.] gi\|91693855, gi\|... - gi\|91781195\|ref\|YP_556402.1\| glutathione S-transferase (BphK) [Burkholderia xenovorans LB400], gi\|91...	190.0	[0..1]	[200..1]
gi\|115522702, gi... - gi\|115522702\|ref\|YP_779613.1\| glutathione S-transferase [Rhodopseudomonas palustris BisA53], gi\|1155...	190.0	[0..1]	[200..1]
gi\|67084304, gi\|... - gi\|67159169\|ref\|ZP_00419875.1\| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te... gi\|67159169, gi\|... - gi\|67159169\|ref\|ZP_00419875.1\| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te...	189.0	[0..1]	[200..1]
gi\|114793737, gi... - gi\|114793738\|pdb\|2DSA\|D Chain D, Ternary Complex Of Bphk, A Bacterial Gst, gi\|114793737\|pdb\|2DSA\|C C... gi\|27528348 - gi\|27528348\|emb\|CAD44474.1\| glutathione S-transferase [Burkholderia xenovorans] gi\|114793738\|pdb... - Chain A, Ternary Complex Of Bphk, A Bacterial Gst, Chain B, Ternary Complex Of Bphk, A Bacterial Gst...	189.0	[0..1]	[200..1]
gi\|75707014, gi\|... - gi\|75707014\|gb\|ABA25977.1\| BphK [Pseudomonas sp. CT14], gi\|190572031\|ref\|YP_001966313.1\| BphK [Pseud...	188.0	[0..1]	[200..1]

Back

Predicted Domain #1

Region A:
Residues: [1-201]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFYKPGAC SLASHITLRE SGKDFTLVSV DLMKKRLENG DDYFAVNPKG QVPALLLDDG  60
   61 TLLTEGVAIM QYLADSVPDR QLLAPVNSIS RYKTIEWLNY IATELHKGFT PLFRPDTPEE 120
  121 YKPTVRAQLE KKLQYVNEAL KDEHWICGQR FTIADAYLFT VLRWAYAVKL NLEGLEHIAA 180
  181 FMQRMAERPE VQDALSAEGL K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.09691
Match:	1a0fA
Description:	Class beta GST
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.04263226837398	bayes_pls_golite062009
antioxidant activity	0.92550006805966	bayes_pls_golite062009
peroxidase activity	0.62384958394125	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	0.62384958394125	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: