YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: XXT2_ARATH
Organism: Arabidopsis thaliana
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XXT2_ARATH.

Description E-value Query
Range
Subject
Range
XXT1_ARATH - Xyloglucan 6-xylosyltransferase 1 OS=Arabidopsis thaliana GN=XXT1 PE=1 SV=1
593.0 [0..1] [459..1]
gi|55956970 - gi|55956970|emb|CAI11449.1| alpha-1,6-xylosyltransferase [Vitis vinifera]
591.0 [0..1] [456..1]
gi|55956986 - gi|55956986|emb|CAI11457.1| putative glycosyltransferase [Solanum tuberosum]
559.0 [0..10] [458..36]
gi|55956972 - gi|55956972|emb|CAI11450.1| alpha-1,6-xylosyltransferase [Pinus taeda]
559.0 [0..6] [456..9]
gi|55956988 - gi|55956988|emb|CAI11458.1| putative glycosyltransferase [Nicotiana benthamiana]
558.0 [0..10] [458..34]
gi|55956984 - gi|55956984|emb|CAI11456.1| putative glycosyltransferase [Lotus japonicus]
538.0 [0..6] [458..19]

Back

Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA  60
   61 RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN KIFVDEGEEE KPDPNKPYTL 120
  121 GPKISDWDEQ RSDWLAKNPS FPN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [144-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FIGPNKPRVL LVTGSAPKPC ENPVGDHYLL KSIKNKIDYC RLHGIEIFYN MALLDAEMAG  60
   61 FWAKLPLIRK LLLSHPEIEF LWWMDSDAMF TDMAFELPWE RYKDYNLVMH GWNEMVYDQK 120
  121 NWIGLNTGSF LLRNNQWALD LLDTWAPMGP KGKIREEAGK VLTRELKDRP VFEADDQSAM 180
  181 VYLLATQRDA WGNKVYLESG YYLHGYWGIL VDRYEEMIEN Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 2p6wA
Description: No description for 2p6wA was found.

Predicted Domain #3
Region A:
Residues: [365-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPGLGDHRWP LVTHFVGCKP CGKFGDYPVE RCLKQMDRAF NFGDNQILQI YGFTHKSLAS  60
   61 RKVKRVRNET SNPLEMKDEL GLLHPAFKAV KVQTNQV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle