YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|151944108
Organism:	Saccharomyces cerevisiae YJM789
Length:	129 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151944108.

Description	E-value	Query Range	Subject Range
FMP43 - Putative protein of unknown function; expression regulated by osmotic and alkaline stresses; the aut... gi\|151943517 - gi\|151943517\|gb\|EDN61828.1\| conserved protein [Saccharomyces cerevisiae YJM789] MPC3_YEAST - Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE... gi\|190406751 - gi\|190406751\|gb\|EDV10018.1\| hypothetical protein SCRG_00781 [Saccharomyces cerevisiae RM11-1a]	181.0	[0..1]	[117..1]
gi\|125777326, gi... - gi\|54639317\|gb\|EAL28719.1\| GA14151-PA [Drosophila pseudoobscura], gi\|125777326\|ref\|XP_001359570.1\| G...	168.0	[0..6]	[125..36]
gi\|50302615, gi\|... - gi\|50302615\|ref\|XP_451243.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640374\|emb\|CAH0283... gi\|49640374 - gi\|49640374\|emb\|CAH02831.1\| KLLA0A05500p [Kluyveromyces lactis]	168.0	[0..3]	[120..2]
gi\|7504062 - gi\|7504062\|pir\|\|T25797 hypothetical protein F53F10.3 - Caenorhabditis elegans	167.0	[0..4]	[109..21]
gi\|49526656 - gi\|49526656\|emb\|CAG60283.1\| unnamed protein product [Candida glabrata] gi\|50289829, gi\|... - gi\|50289829\|ref\|XP_447346.1\| hypothetical protein CAGL0I02178g [Candida glabrata CBS138], gi\|4952665...	163.0	[0..1]	[124..1]
gi\|44983293 - gi\|44983293\|gb\|AAS52475.1\| AEL210Cp [Ashbya gossypii ATCC 10895] gi\|45190397, gi\|... - gi\|45190397\|ref\|NP_984651.1\| AEL210Cp [Ashbya gossypii ATCC 10895], gi\|44983293\|gb\|AAS52475.1\| AEL21...	163.0	[0..1]	[117..1]
gi\|12852283 - gi\|12852283\|dbj\|BAB29347.1\| unnamed protein product [Mus musculus]	163.0	[0..2]	[106..63]
gi\|7488128, gi\|7... - pir\|\|F71409 probable light induced protein - Arabidopsis thaliana, gi\|7268175\|emb\|CAB78511.1\| light ...	163.0	[0..1]	[106..210]

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Predicted Domain #1

Region A:
Residues: [1-129]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSSVRFAF RRFWQSETGP KTVHFWAPTL KWGLVFAGFS DMKRPVEKIS GAQNLSLLST  60
   61 ALIWTRWSFV IKPRNILLAS VNSFLCLTAG YQLGRIANYR IRNGDSISQL CSYILSGADE 120
  121 SKKEITTGR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	80.275724
Match:	PF03650.4
Description:	No description for PF03650.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits