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View Structure Prediction Details

Protein: GLF_ECOLI
Organism: Escherichia coli
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLF_ECOLI.

Description E-value Query
Range
Subject
Range
gi|163865146, gi... - gi|89206659|ref|ZP_01185214.1| UDP-galactopyranose mutase [Bacillus weihenstephanensis KBAB4], gi|89...
306.0 [0..1] [365..1]
gi|68643511 - gi|68643511|emb|CAI33747.1| UDP-galactopyranose mutase Glf [Streptococcus pneumoniae]
305.0 [0..1] [366..1]
gi|119945716, gi... - gi|119945716|ref|YP_943396.1| UDP-galactopyranose mutase [Psychromonas ingrahamii 37], gi|119864320|...
303.0 [0..2] [363..3]
gi|28849814 - gi|28849814|gb|AAN64570.1| UDP-galactopyranose mutase [Streptococcus gordonii]
302.0 [0..1] [366..1]

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Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDYIIVGSG LFGAVCANEL KKLNKKVLVI EKRNHIGGNA YTEDCEGIQI HKYGAHIFHT  60
   61 NDKYIWDYVN DLVEFNRFTN SPLAIYKDKL FNLPFNMNTF HQMWGVKDPQ EAQNIINAQK 120
  121 KKYGDKVPEN LEEQAISLVG EDLYQALIKG YTEKQWGRSA KELPAFIIKR IPVRFTFDNN 180
  181 YFSDRYQGIP VGGYTKLIEK MLEGVDVKLG IDFLKDKDSL ASKAHRIIYT GPIDQYFDYR 240
  241 FGALEYRSLK FETERHEFPN FQGNAVINFT DANVPYTRII EHKHFDYVET KHTVVTKEYP 300
  301 LEWKVGDEPY YPVNDNKNME LFKKYRELAS REDKVIFGGR LAEYKYYDMH QVISAALYQV 360
  361 KNIMSTD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.0
Match: 1i8tA
Description: UDP-galactopyranose mutase, N-terminal domain; UDP-galactopyranose mutases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.859115530599733 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle