YRC Public Data Repository - Protein Structure Prediction

Protein:	GLCC_ECOLI
Organism:	Escherichia coli
Length:	254 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLCC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|89081562, gi\|... - gi\|89094087\|ref\|ZP_01167030.1\| transcriptional regulator of pyruvate dehydrogenase complex [Oceanosp...	180.0	[0..2]	[248..5]
gi\|56420550, gi\|... - gi\|56420550\|ref\|YP_147868.1\| transcriptional regulator [Geobacillus kaustophilus HTA426], gi\|5638039...	179.0	[0..2]	[232..16]
gi\|134300032, gi... - gi\|88945079\|ref\|ZP_01148299.1\| regulatory protein GntR, HTH [Desulfotomaculum reducens MI-1], gi\|889...	178.0	[0..2]	[235..5]
gi\|114769968 - gi\|114769968\|ref\|ZP_01447578.1\| pyruvate dehydrogenase complex repressor [alpha proteobacterium HTCC... gi\|114769968, gi... - gi\|114769968\|ref\|ZP_01447578.1\| pyruvate dehydrogenase complex repressor [alpha proteobacterium HTCC...	173.0	[0..2]	[251..5]
gi\|39983607, gi\|... - gi\|39996726\|ref\|NP_952677.1\| GntR family transcriptional regulator [Geobacter sulfurreducens PCA], g...	172.0	[0..2]	[231..5]
gi\|77359356, gi\|... - gi\|77359356\|ref\|YP_338931.1\| transcriptional regulator PdhR [Pseudoalteromonas haloplanktis TAC125],...	172.0	[0..1]	[252..3]
gi\|150391479, gi... - gi\|77686091\|ref\|ZP_00801461.1\| regulatory protein GntR, HTH:GntR, C-terminal [Alkaliphilus metallire...	172.0	[0..2]	[232..4]
gi\|52008623, gi\|... - gi\|99082429\|ref\|YP_614583.1\| GntR family transcriptional regulator [Silicibacter sp. TM1040], gi\|990...	171.0	[0..2]	[252..5]
gi\|147678568, gi... - gi\|98662020\|dbj\|GAA01035.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476785...	170.0	[0..2]	[232..16]

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Predicted Domain #1

Region A:
Residues: [1-254]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDERRPICE VVAESIERLI IDGVLKVGQP LPSERRLCEK LGFSRSALRE GLTVLRGRGI  60
   61 IETAQGRDSR VARLNRVQDT SPLIHLFSTQ PRTLYDLLDV RALLEGESAR LAATLGTQAD 120
  121 FVVITRCYEK MLAASENNKE ISLIEHAQLD HAFHLAICQA SHNQVLVFTL QSLTDLMFNS 180
  181 VFASVNNLYH RPQQKKQIDR QHARIYNAVL QRLPHVAQRA ARDHVRTVKK NLHDIELEGH 240
  241 HLIRSAVPLE MNLS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.522879
Match:	2di3A
Description:	No description for 2di3A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits