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View Structure Prediction Details

Protein: CG10000-PA
Organism: Drosophila melanogaster
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10000-PA.

Description E-value Query
Range
Subject
Range
gi|21064519 - gi|21064519|gb|AAM29489.1| RE45347p [Drosophila melanogaster]
357.0 [0..1] [558..1]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHAGGKYCGP RHCSFYIIAF LICQLFFLVI FIRNDDASSA NELLSFMNES EESDHLDWRV  60
   61 FISHTPETSE DFYQYNIHLS NALGLIRKLP VTRHHSCTTR NSILPAPLEA NVSVVISFHN 120
  121 EARSMLLRTI VSLLSRSPED YLHELILVDD GSQRDVTLLD DLKRWMGGVF GSRYRLGLTF 180
  181 LRNQERMGLI WSRNRGASLA SGRYVLFLDS HCEVNEGWLE PLLERLALNT NLAVSPLLDP 240
  241 IDPTTLSYRK GNELLKGGFD WSLHFHWLKR QLTNQESLEM PYQSPAFAGG VLMMSREWFL 300
  301 KLGSFNPYLK IWGGESIELA IKLWLCGGQI EIVPCSRIGH IFRRRHAFDF PPQSDRQLSP 360
  361 AQETYLHNSK IIAESWLDEY KNMFYALRPA ARRIPLDHTY DELQRMRKER RCHPFEWYLR 420
  421 HVSPELRMHF DELSATGTLR NEDRCVHARQ KDSQPILASC YLSDITQWSM LRQSGQLSTH 480
  481 RELCLAVGFG MRIALEPCGR NETVRRSQRW VRLGTHLLHA ESHLCLDNPL KDRLEMSTCR 540
  541 SHAVSQSFQF ALEMEGQT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.221849
Match: 2ffuA
Description: Crystal Structure of Human ppGalNAcT-2 complexed with UDP and EA2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle