YRC Public Data Repository - Protein Structure Prediction

Protein:	GALF_ECOLI
Organism:	Escherichia coli
Length:	297 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GALF_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|238727245, gi... - gi\|77978860\|ref\|ZP_00834284.1\| COG1210: UDP-glucose pyrophosphorylase [Yersinia intermedia ATCC 2990...	279.0	[0..1]	[296..1]
gi\|77975883, gi\|... - gi\|77975883\|ref\|ZP_00831417.1\| COG1210: UDP-glucose pyrophosphorylase [Yersinia frederiksenii ATCC 3...	278.0	[0..1]	[296..1]
gi\|238720491, gi... - gi\|77962468\|ref\|ZP_00826288.1\| COG1210: UDP-glucose pyrophosphorylase [Yersinia mollaretii ATCC 4396...	278.0	[0..1]	[296..1]
gi\|74277460, gi\|... - gi\|75428786\|ref\|ZP_00731901.1\| UTP--glucose-1-phosphate uridylyltransferase [Actinobacillus succinog...	277.0	[0..4]	[296..1]
gi\|227903507, gi... - gi\|227903507\|ref\|ZP_04021312.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus acidophil... gi\|58254267, gi\|... - gi\|58336950\|ref\|YP_193535.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus acidophilus ...	277.0	[0..1]	[297..1]
gi\|42519467, gi\|... - gi\|42519467\|ref\|NP_965397.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus johnsonii N...	276.0	[0..1]	[297..1]
gi\|90328351, gi\|... - gi\|90410720\|ref\|ZP_01218735.1\| putative UTP-glucose-1-phosphateuridylyltransferase, galU [Photobacte...	275.0	[0..3]	[297..4]
gi\|76590943, gi\|... - gi\|76793761\|ref\|ZP_00776243.1\| UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal ...	274.0	[0..1]	[296..1]
gi\|238714794, gi... - gi\|77959278\|ref\|ZP_00823299.1\| COG1210: UDP-glucose pyrophosphorylase [Yersinia bercovieri ATCC 4397...	274.0	[0..1]	[296..2]
gi\|114770523 - gi\|114770523\|ref\|ZP_01448013.1\| UTP-glucose-1-phosphate uridylyltransferase [alpha proteobacterium H... gi\|221133331 - gi\|221133331\|ref\|ZP_03559636.1\| putative glucose-1-phosphate uridylyltransferase [Glaciecola sp. HTC... gi\|114548704, gi... - gi\|114770523\|ref\|ZP_01448013.1\| UTP-glucose-1-phosphate uridylyltransferase [alpha proteobacterium H...	274.0	[0..1]	[294..1]

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Predicted Domain #1

Region A:
Residues: [1-297]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNLKAVIPV AGLGMHMLPA TKAIPKEMLP IVDKPMIQYI VDEIVAAGIK EILLVTHASK  60
   61 NAVENHFDTS YELESLLEQR VKRQLLAEVQ SICPPGVTIM NVRQGEPLGL GHSILCARPA 120
  121 IGDNPFVVVL PDVVIDDASA DPLRYNLAAM IARFNETGRS QVLAKRMPGD LSEYSVIQTK 180
  181 EPLDREGKVS RIVEFIEKPD QPQTLDSDIM AVGRYVLSAD IWPELERTQP GAWGRIQLTD 240
  241 AIAELAKKQS VDAMLMTGDS YDCGKKMGYM QAFVKYGLRN LKEGAKFRKG IEKLLSE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	72.154902
Match:	2e3dA
Description:	No description for 2e3dA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits