YRC Public Data Repository - Protein Structure Prediction

Protein:	FTSX_ECOLI
Organism:	Escherichia coli
Length:	352 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FTSX_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|56415468, gi\|... - gi\|56415468\|ref\|YP_152543.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar... gi\|197364397, gi... - gi\|197364397\|ref\|YP_002144034.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser...	230.0	[0..1]	[352..1]
gi\|205354813, gi... - gi\|205354813\|ref\|YP_002228614.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|207858807, gi... - gi\|207858807\|ref\|YP_002245458.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|16766855, gi\|... - gi\|16766855\|ref\|NP_462470.1\| cell division protein FtsX [Salmonella typhimurium LT2], gi\|16422129\|gb... gi\|198246240, gi... - gi\|198246240\|ref\|YP_002217527.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|199604633, gi... - gi\|200387535\|ref\|ZP_03214147.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|197214061, gi... - gi\|197250358\|ref\|YP_002148492.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|197261743, gi... - gi\|197261743\|ref\|ZP_03161817.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|194406861, gi... - gi\|194448557\|ref\|YP_002047594.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|194458149, gi... - gi\|194471785\|ref\|ZP_03077769.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|195632323, gi... - gi\|195632323\|gb\|EDX50807.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar ... gi\|194445196, gi... - gi\|194445196\|ref\|YP_002042814.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|168241721, gi... - gi\|205338783\|gb\|EDZ25547.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar ... gi\|168260702, gi... - gi\|205350417\|gb\|EDZ37048.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar ... gi\|167990785, gi... - gi\|205330728\|gb\|EDZ17492.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar ... gi\|168232716, gi... - gi\|205333158\|gb\|EDZ19922.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar ... gi\|161616617, gi... - gi\|161616617\|ref\|YP_001590582.1\| cell division protein FtsX [Salmonella enterica subsp. enterica ser... gi\|205325860, gi... - gi\|205325860\|gb\|EDZ13699.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar ... gi\|238910430 - gi\|238910430\|ref\|ZP_04654267.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... lcl\|NC_016856.1_... - [gene=ftsX] [protein=cell division protein FtsX] [protein_id=YP_005239781.1] [location=complement(37...	230.0	[0..1]	[352..1]
gi\|213053206 - gi\|213053206\|ref\|ZP_03346084.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|214002992 - gi\|214002992\|ref\|ZP_03413727.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|213857358 - gi\|213857358\|ref\|ZP_03384329.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|213649998 - gi\|213649998\|ref\|ZP_03380051.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|213426833 - gi\|213426833\|ref\|ZP_03359583.1\| cell division protein FtsX [Salmonella enterica subsp. enterica sero... gi\|16762735 - gi\|16762735\|ref\|NP_458352.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar... gi\|16505041, gi\|... - gi\|25300169\|pir\|\|AI0991 cell division protein [imported] - Salmonella enterica subsp. enterica serov... gi\|29144222, gi\|... - gi\|29144222\|ref\|NP_807564.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar...	229.0	[0..1]	[352..1]
gi\|62182068, gi\|... - gi\|62182068\|ref\|YP_218485.1\| cell division protein FtsX [Salmonella enterica subsp. enterica serovar... gi\|224585361, gi... - gi\|224585361\|ref\|YP_002639160.1\| cell division protein [Salmonella enterica subsp. enterica serovar ...	229.0	[0..1]	[352..1]
gi\|26110506, gi\|... - gi\|26250077\|ref\|NP_756117.1\| Cell division protein ftsX [Escherichia coli CFT073], gi\|26110506\|gb\|AA... gi\|24114722, gi\|... - ref\|NP_709232.1\| cell division membrane protein [Shigella flexneri 2a str. 301], gb\|AAN44939.1\| cel... gi\|226839136, gi... - gi\|254038630\|ref\|ZP_04872686.1\| cell division protein ftsX [Escherichia sp. 1_1_43], gi\|226839136\|gb... tr\|A0A0G3I0T7\|A0... - Inner membrane putative ABC superfamilytransporter permease protein OS=Escherichia coli (strain K12)... gi\|91074525, gi\|... - gi\|91212951\|ref\|YP_542937.1\| cell division membrane protein [Escherichia coli UTI89], gi\|91074525\|gb... gi\|117625740, gi... - gi\|117625740\|ref\|YP_859063.1\| cell division protein FtsX [Escherichia coli APEC O1], gi\|115514864\|gb... gi\|226902473, gi... - gi\|237703209\|ref\|ZP_04533690.1\| cell division protein ftsX [Escherichia sp. 3_2_53FAA], gi\|226902473...	228.0	[0..1]	[352..10]
gi\|187731843, gi... - gi\|187731843\|ref\|YP_001882151.1\| cell division protein FtsX [Shigella boydii CDC 3083-94], gi\|187428... gi\|170018306, gi... - gi\|170018306\|ref\|YP_001723260.1\| cell division protein FtsX [Escherichia coli ATCC 8739], gi\|1697532... gi\|124528619, gi... - gi\|124528619\|ref\|ZP_01699897.1\| putative protein insertion ABC transporter, inner membrane subunit F... gi\|82545825, gi\|... - gi\|82545825\|ref\|YP_409772.1\| cell division protein FtsX [Shigella boydii Sb227], gi\|81247236\|gb\|ABB6...	227.0	[0..1]	[352..1]
gi\|75179907 - gi\|75179907\|ref\|ZP_00699894.1\| COG2177: Cell division protein [Shigella boydii BS512]	227.0	[0..1]	[352..6]
gi\|74314062, gi\|... - gi\|74314062\|ref\|YP_312481.1\| cell division protein FtsX [Shigella sonnei Ss046], gi\|73857539\|gb\|AAZ9...	227.0	[0..1]	[352..1]
gi\|75516073 - gi\|75516073\|ref\|ZP_00738191.1\| COG2177: Cell division protein [Escherichia coli 53638] gi\|75260251 - gi\|75260251\|ref\|ZP_00731519.1\| COG2177: Cell division protein [Escherichia coli E22] gi\|75242741 - gi\|75242741\|ref\|ZP_00726485.1\| COG2177: Cell division protein [Escherichia coli F11] gi\|75227172 - gi\|75227172\|ref\|ZP_00713980.1\| COG2177: Cell division protein [Escherichia coli B7A] gi\|75211827 - gi\|75211827\|ref\|ZP_00711891.1\| COG2177: Cell division protein [Escherichia coli B171] gi\|75197388 - gi\|75197388\|ref\|ZP_00707458.1\| COG2177: Cell division protein [Escherichia coli HS] gi\|75188234 - gi\|75188234\|ref\|ZP_00701501.1\| COG2177: Cell division protein [Escherichia coli E24377A] gi\|83588676 - gi\|83588676\|ref\|ZP_00927300.1\| COG2177: Cell division protein [Escherichia coli 101-1] gi\|194420680, gi... - gi\|83571613\|ref\|ZP_00923053.1\| COG2177: Cell division protein [Shigella dysenteriae 1012], gi\|194431... gi\|227839487, gi... - gi\|227883608\|ref\|ZP_04001413.1\| cell division protein FtsX [Escherichia coli 83972], gi\|227839487\|gb...	227.0	[0..1]	[352..6]
gi\|75237061 - gi\|75237061\|ref\|ZP_00721117.1\| COG2177: Cell division protein [Escherichia coli E110019]	227.0	[0..1]	[352..6]

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Predicted Domain #1

Region A:
Residues: [1-117]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKRDAINHI RQFGGRLDRF RKSVGGSGDG GRNAPKRAKS SPKPVNRKTN VFNEQVRYAF  60
   61 HGALQDLKSK PFATFLTVMV IAISLTLPSV CYMVYKNVNQ AATQYYPSPQ ITVYLQK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [118-352]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLDDDAAAGV VAQLQAEQGV EKVNYLSRED ALGEFRNWSG FGGALDMLEE NPLPAVAVVI  60
   61 PKLDFQGTES LNTLRDRITQ INGIDEVRMD DSWFARLAAL TGLVGRVSAM IGVLMVAAVF 120
  121 LVIGNSVRLS IFARRDSINV QKLIGATDGF ILRPFLYGGA LLGFSGALLS LILSEILVLR 180
  181 LSSAVAEVAQ VFGTKFDING LSFDECLLLL LVCSMIGWVA AWLATVQHLR HFTPE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	26.327902
Match:	PF02687.12
Description:	No description for PF02687.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits