YRC Public Data Repository - Protein Structure Prediction

Protein:	FTSN_ECOLI
Organism:	Escherichia coli
Length:	319 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FTSN_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|208814043, gi... - gi\|208814043\|ref\|ZP_03255372.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4045], g... gi\|208740690, gi... - gi\|208820567\|ref\|ZP_03260887.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4042], g... gi\|209400145, gi... - gi\|209400145\|ref\|YP_002273453.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4115], ... gi\|217321745, gi... - gi\|217325524\|ref\|ZP_03441608.1\| cell division protein FtsN [Escherichia coli O157:H7 str. TW14588], ... gi\|189373435, gi... - gi\|189373435\|gb\|EDU91851.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC869], gi\|168... gi\|168799484, gi... - gi\|189378102\|gb\|EDU96518.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC508], gi\|168... gi\|254595335, gi... - gi\|254795935\|ref\|YP_003080772.1\| essential cell division protein [Escherichia coli O157:H7 str. TW14... gi\|13364336, gi\|... - gi\|15834114\|ref\|NP_312887.1\| essential cell division protein [Escherichia coli O157:H7], gi\|13364336... gi\|195937577 - gi\|195937577\|ref\|ZP_03082959.1\| essential cell division protein [Escherichia coli O157:H7 str. EC402... gi\|209752232, gi... - pir\|\|D86083 essential cell division protein [imported] - Escherichia coli (strain O157:H7, substrain... gi\|208807281, gi... - gi\|208807281\|ref\|ZP_03249618.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4206], g... gi\|189367905, gi... - gi\|189367905\|gb\|EDU86321.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4501], gi\|16... gi\|15804524, gi\|... - gi\|15804524\|ref\|NP_290564.1\| essential cell division protein [Escherichia coli O157:H7 EDL933], gi\|1... gi\|189362570, gi... - gi\|189362570\|gb\|EDU80989.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4486], gi\|16... gi\|187769133, gi... - gi\|187769133\|gb\|EDU32977.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4196], gi\|16... gi\|82778891, gi\|... - gi\|82778891\|ref\|YP_405240.1\| essential cell division protein [Shigella dysenteriae Sd197], gi\|812430... gi\|189001479, gi... - gi\|189001479\|gb\|EDU70465.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4076], gi\|16... gi\|168748767, gi... - gi\|188016735\|gb\|EDU54857.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4113], gi\|16... gi\|189357206, gi... - gi\|189357206\|gb\|EDU75625.1\| cell division protein FtsN [Escherichia coli O157:H7 str. EC4401], gi\|16... gi\|13364336, gi\|... - gi\|15834114\|ref\|NP_312887.1\| essential cell division protein FtsN [Escherichia coli O157:H7 str. Sak...	167.0	[0..1]	[319..1]
gi\|26250700, gi\|... - gi\|26250700\|ref\|NP_756740.1\| essential cell division protein [Escherichia coli CFT073], gi\|26111131\|...	167.0	[0..1]	[319..1]
gi\|191172675, gi... - gi\|191172675\|ref\|ZP_03034213.1\| cell division protein FtsN [Escherichia coli F11], gi\|190906979\|gb\|E... gi\|110345861, gi... - gi\|110644269\|ref\|YP_671999.1\| essential cell division protein FtsN [Escherichia coli 536], gi\|110345...	165.0	[0..1]	[319..1]
gi\|218697647, gi... - gi\|218697647\|ref\|YP_002405314.1\| essential cell division protein FtsN [Escherichia coli 55989], gi\|2... gi\|157158424, gi... - gi\|157158424\|ref\|YP_001465427.1\| essential cell division protein [Escherichia coli E24377A], gi\|1570... gi\|218701362, gi... - gi\|218701362\|ref\|YP_002408991.1\| essential cell division protein FtsN [Escherichia coli IAI39], gi\|2... gi\|218363264, gi... - gi\|218556495\|ref\|YP_002389409.1\| essential cell division protein FtsN [Escherichia coli IAI1], gi\|21... gi\|218561000, gi... - gi\|218561000\|ref\|YP_002393913.1\| essential cell division protein FtsN [Escherichia coli S88], gi\|218... gi\|194433238, gi... - gi\|194433238\|ref\|ZP_03065519.1\| cell division protein FtsN [Shigella dysenteriae 1012], gi\|194418522... gi\|209921413, gi... - gi\|209921413\|ref\|YP_002295497.1\| essential cell division protein FtsN [Escherichia coli SE11], gi\|20... gi\|187730328, gi... - gi\|187730328\|ref\|YP_001882628.1\| cell division protein FtsN [Shigella boydii CDC 3083-94], gi\|187427... gi\|115515323, gi... - gi\|117626199\|ref\|YP_859522.1\| essential cell division protein [Escherichia coli APEC O1], gi\|1155153... gi\|190903530, gi... - gi\|191166430\|ref\|ZP_03028261.1\| cell division protein FtsN [Escherichia coli B7A], gi\|190903530\|gb\|E... gi\|170683167, gi... - gi\|170683167\|ref\|YP_001746320.1\| cell division protein FtsN [Escherichia coli SMS-3-5], gi\|170520885... gi\|91213475, gi\|... - gi\|91213475\|ref\|YP_543461.1\| essential cell division protein [Escherichia coli UTI89], gi\|91075049\|g... gi\|110617342, gi... - gi\|110807794\|ref\|YP_691314.1\| essential cell division protein [Shigella flexneri 5 str. 8401], gi\|11... gi\|24054512, gi\|... - gi\|24115227\|ref\|NP_709737.1\| essential cell division protein [Shigella flexneri 2a str. 301], gi\|240... gi\|30043034, gi\|... - gi\|30064774\|ref\|NP_838945.1\| essential cell division protein [Shigella flexneri 2a str. 2457T], gi\|3... gi\|74314433, gi\|... - gi\|74314433\|ref\|YP_312852.1\| essential cell division protein [Shigella sonnei Ss046], gi\|73857910\|gb... gi\|82546282, gi\|... - gi\|82546282\|ref\|YP_410229.1\| essential cell division protein [Shigella boydii Sb227], gi\|81247693\|gb... gi\|237702966, gi... - gi\|237702966\|ref\|ZP_04533447.1\| essential cell division protein [Escherichia sp. 3_2_53FAA], gi\|2269...	164.0	[0..1]	[319..1]
gi\|290448 - gi\|290448\|gb\|AAA23814.1\| cell division protein [Escherichia coli]	163.0	[0..1]	[319..1]
gi\|56130194, gi\|... - gi\|56415937\|ref\|YP_153012.1\| essential cell division protein FtsN [Salmonella enterica subsp. enteri...	155.0	[0..1]	[319..1]
lcl\|NC_016856.1_... - [gene=ftsN] [protein=essential cell division protein] [protein_id=YP_005240374.1] [location=compleme... gi\|16422660, gi\|... - gi\|16767359\|ref\|NP_462974.1\| essential cell division protein [Salmonella typhimurium LT2], gi\|164226... gi\|205359965, gi... - gi\|205359965\|ref\|ZP_03224474.1\| cell division protein FtsN [Salmonella enterica subsp. enterica sero... gi\|197264434, gi... - gi\|197264434\|ref\|ZP_03164508.1\| cell division protein FtsN [Salmonella enterica subsp. enterica sero... gi\|205357709, gi... - gi\|205357709\|ref\|ZP_03223812.1\| cell division protein FtsN [Salmonella enterica subsp. enterica sero... gi\|197214190, gi... - gi\|197250487\|ref\|YP_002149021.1\| cell division protein FtsN [Salmonella enterica subsp. enterica ser...	152.0	[0..1]	[319..1]
gi\|25513227, gi\|... - gi\|25513227\|pir\|\|AH0938 cell division protein [imported] - Salmonella enterica subsp. enterica serov... gi\|16762342 - gi\|16762342\|ref\|NP_457959.1\| essential cell division protein [Salmonella enterica subsp. enterica se...	149.0	[0..1]	[319..1]
gi\|29139466, gi\|... - gi\|29143830\|ref\|NP_807172.1\| essential cell division protein [Salmonella enterica subsp. enterica se...	149.0	[0..1]	[319..1]
gi\|62130185, gi\|... - gi\|62182552\|ref\|YP_218969.1\| essential cell division protein [Salmonella enterica subsp. enterica se...	147.0	[0..1]	[319..1]

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Predicted Domain #1

Region A:
Residues: [1-233]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQRDYVRRS QPAPSRRKKS TSRKKQRNLP AVSPAMVAIA AAVLVTFIGG LYFITHHKKE  60
   61 ESETLQSQKV TGNGLPPKPE ERWRYIKELE SRQPGVRAPT EPSAGGEVKT PEQLTPEQRQ 120
  121 LLEQMQADMR QQPTQLVEVP WNEQTPEQRQ QTLQRQRQAQ QLAEQQRLAQ QSRTTEQSWQ 180
  181 QQTRTSQAAP VQAQPRQSKP ASSQQPYQDL LQTPAHTTAQ SKPQQAAPVA RAA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.27
Match:	2j63A
Description:	No description for 2j63A was found.

Predicted Domain #2

Region A:
Residues: [234-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAPKPTAEKK DERRWMVQCG SFRGAEQAET VRAQLAFEGF DSKITTNNGW NRVVIGPVKG  60
   61 KENADSTLNR LKMAGHTNCI RLAAGG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.522879
Match:	1utaA
Description:	Solution structure of the C-terminal RNP domain from the divisome protein FtsN
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits