YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGL_ECOLI
Organism:	Escherichia coli
Length:	317 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGL_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|37525877, gi\|... - gi\|37525877\|ref\|NP_929221.1\| flagellin [Photorhabdus luminescens subsp. laumondii TTO1], gi\|36785306...	219.0	[0..3]	[317..5]
FLA2_TREPH - Flagellar filament 33 kDa core protein OS=Treponema phagedenis PE=1 SV=2	218.0	[0..1]	[317..1]
gi\|150388630, gi... - gi\|77687392\|ref\|ZP_00802635.1\| Flagellin, C-terminal:Flagellin, N-terminal [Alkaliphilus metalliredi...	217.0	[0..1]	[316..1]
gi\|194360421 - gi\|194360421\|gb\|ACF57860.1\| flagellin [Bacillus licheniformis] gi\|52082071, gi\|... - gi\|52787460\|ref\|YP_093289.1\| flagellin [Bacillus licheniformis ATCC 14580], gi\|52349962\|gb\|AAU42596....	217.0	[0..1]	[317..1]
FLIC_XENNE - Flagellin OS=Xenorhabdus nematophila GN=fliC PE=3 SV=1	211.0	[0..3]	[317..5]
FLAB2_TREPA, FLA... - Flagellar filament 33 kDa core protein OS=Treponema pallidum GN=flaB2 PE=1 SV=2, (P21991) Flagellar ... FLAB2_TREPA - Flagellar filament 33 kDa core protein OS=Treponema pallidum (strain Nichols) GN=flaB2 PE=1 SV=2 gi\|94602 - pir\|\|A37053 flagellar filament 33K core protein flaB2 - syphilis spirochete gi\|189026017, gi... - gi\|189026017\|ref\|YP_001933789.1\| flagellar filament 33 kDa core protein [Treponema pallidum subsp. p...	210.0	[0..1]	[317..1]
gi\|45657404, gi\|... - gi\|45657404\|ref\|YP_001490.1\| flagellin protein [Leptospira interrogans serovar Copenhageni str. Fioc...	209.0	[0..1]	[317..1]
gi\|116328165, gi... - gi\|116328165\|ref\|YP_797885.1\| endoflagellar filament core protein [Leptospira borgpetersenii serovar... gi\|116330890, gi... - gi\|116330890\|ref\|YP_800608.1\| endoflagellar filament core protein [Leptospira borgpetersenii serovar...	209.0	[0..1]	[317..1]
gi\|24196180, gi\|... - gi\|24215118\|ref\|NP_712599.1\| hook-associated protein, flagellin family [Leptospira interrogans serov...	209.0	[0..1]	[317..1]
gi\|56421666, gi\|... - gi\|56421666\|ref\|YP_148984.1\| flagellin protein [Geobacillus kaustophilus HTA426], gi\|56381508\|dbj\|BA...	209.0	[0..1]	[297..1]

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Predicted Domain #1

Region A:
Residues: [1-317]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSTQMMYQ QNMRGITNSQ AEWMKYGEQM STGKRVVNPS DDPIAASQAV VLSQAQAQNS  60
   61 QYTLARTFAT QKVSLEESVL SQVTTAIQNA QEKIVYASNG TLSDDDRASL ATDIQGLRDQ 120
  121 LLNLANTTDG NGRYIFAGYK TETAPFSEEK GKYVGGAESI KQQVDASRSM VIGHTGDKIF 180
  181 DSITSNAVAE PDGSASETNL FAMLDSAIAA LKTPVADSEA DKETAAAALD KTNRGLKNSL 240
  241 NNVLTVRAEL GTQLNELESL DSLGSDRALG QTQQMSDLVD VDWNATISSY IMQQTALQAS 300
  301 YKAFTDMQGL SLFQLSK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.30103
Match:	2d4xA
Description:	No description for 2d4xA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits