YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGJ_ECOLI
Organism:	Escherichia coli
Length:	313 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGJ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|81241454, gi\|... - gi\|82777306\|ref\|YP_403655.1\| peptidoglycan hydrolase [Shigella dysenteriae Sd197], gi\|81241454\|gb\|AB...	296.0	[0..1]	[313..1]
gi\|26247221, gi\|... - gi\|26247221\|ref\|NP_753261.1\| flagellar biosynthesis protein [Escherichia coli CFT073], gi\|26107622\|g...	296.0	[0..1]	[313..11]
gi\|75240677 - gi\|75240677\|ref\|ZP_00724594.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli F11]	295.0	[0..1]	[313..11]
gi\|188999108, gi... - gi\|188999108\|gb\|EDU68094.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|168790016, gi... - gi\|189370504\|gb\|EDU88920.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|25356671, gi\|... - pir\|\|G85670 flagellar biosynthesis [imported] - Escherichia coli (strain O157:H7, substrain EDL933)... gi\|189375943, gi... - gi\|189375943\|gb\|EDU94359.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|195935471 - gi\|195935471\|ref\|ZP_03080853.1\| peptidoglycan hydrolase [Escherichia coli O157:H7 str. EC4024] gi\|168758626, gi... - gi\|189354566\|gb\|EDU72985.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|15801198, gi\|... - gi\|15801198\|ref\|NP_287215.1\| peptidoglycan hydrolase [Escherichia coli O157:H7 EDL933], gi\|12514622\|... gi\|189365517, gi... - gi\|189365517\|gb\|EDU83933.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|189363029, gi... - gi\|189363029\|gb\|EDU81448.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|187770470, gi... - gi\|187770470\|gb\|EDU34314.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... FLGJ_ECO57 - Peptidoglycan hydrolase FlgJ OS=Escherichia coli O157:H7 GN=flgJ PE=3 SV=1 gi\|15830713, gi\|... - gi\|15830713\|ref\|NP_309486.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H... gi\|188018183, gi... - gi\|188018183\|gb\|EDU56305.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O157:H7... gi\|217328303, gi... - gi\|217328303\|ref\|ZP_03444385.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O15... gi\|208728022, gi... - gi\|208808221\|ref\|ZP_03250558.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O15... gi\|208816199, gi... - gi\|208816199\|ref\|ZP_03257378.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O15... gi\|208822041, gi... - gi\|208822041\|ref\|ZP_03262360.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O15... gi\|254792463, gi... - gi\|254792463\|ref\|YP_003077300.1\| muramidase [Escherichia coli O157:H7 str. TW14359], gi\|254591863\|gb... gi\|209396103, gi... - gi\|209396103\|ref\|YP_002269927.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli O1...	295.0	[0..1]	[313..1]
gi\|75513525 - gi\|75513525\|ref\|ZP_00735929.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli 53638] gi\|75235915 - gi\|75235915\|ref\|ZP_00720052.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli E110019] gi\|75228349 - gi\|75228349\|ref\|ZP_00714999.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli B7A] gi\|75195265 - gi\|75195265\|ref\|ZP_00705335.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli HS] gi\|75190139 - gi\|75190139\|ref\|ZP_00703406.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli E24377A] gi\|83586385 - gi\|83586385\|ref\|ZP_00925019.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli 101-1] gi\|124532257, gi... - gi\|124532257\|ref\|ZP_01702176.1\| flagellar rod assembly protein/muramidase FlgJ [Escherichia coli B],...	295.0	[0..1]	[313..11]
gi\|75257517 - gi\|75257517\|ref\|ZP_00729020.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli E22] gi\|75210352 - gi\|75210352\|ref\|ZP_00710514.1\| COG1705: Muramidase (flagellum-specific) [Escherichia coli B171]	295.0	[0..1]	[313..11]
gi\|56479818, gi\|... - gi\|56479818\|ref\|NP_706999.2\| peptidoglycan hydrolase [Shigella flexneri 2a str. 301], gi\|56383369\|gb... gi\|162139349 - gi\|162139349\|ref\|YP_688618.2\| peptidoglycan hydrolase [Shigella flexneri 5 str. 8401] gi\|30040863, gi\|... - gi\|30062617\|ref\|NP_836788.1\| peptidoglycan hydrolase [Shigella flexneri 2a str. 2457T], gi\|30040863\|...	294.0	[0..1]	[313..1]
gi\|237706933, gi... - gi\|237706933\|ref\|ZP_04537414.1\| peptidoglycan hydrolase FlgJ [Escherichia sp. 3_2_53FAA], gi\|2268981... gi\|115512391, gi... - gi\|117623267\|ref\|YP_852180.1\| peptidoglycan hydrolase FlgJ [Escherichia coli APEC O1], gi\|115512391\|... gi\|91071807, gi\|... - gi\|91210233\|ref\|YP_540219.1\| peptidoglycan hydrolase FlgJ [Escherichia coli UTI89], gi\|91071807\|gb\|A...	293.0	[0..1]	[313..11]
gi\|110805098, gi... - gi\|110805098\|ref\|YP_688618.1\| flagellar protein FlgJ [Shigella flexneri 5 str. 8401], gi\|110614646\|g... gi\|24112489, gi\|... - ref\|NP_706999.1\| flagellar biosynthesis [Shigella flexneri 2a str. 301], gb\|AAN42706.1\| flagellar b...	293.0	[0..1]	[313..11]
gi\|110342849, gi... - gi\|110641257\|ref\|YP_668987.1\| peptidoglycan hydrolase FlgJ [Escherichia coli 536], gi\|110342849\|gb\|A...	293.0	[0..1]	[313..11]

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Predicted Domain #1

Region A:
Residues: [1-143]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISDSKLLAS AAWDAQSLNE LKAKAGEDPA ANIRPVARQV EGMFVQMMLK SMRDALPKDG  60
   61 LFSSEHTRLY TSMYDQQIAQ QMTAGKGLGL AEMMVKQMTP EQPLPEESTP AAPMKFPLET 120
  121 VVRYQNQALS QLVQKAVPRN YDD

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.656	0.430	flagellum assembly	a.45.1	Glutathione S-transferase (GST), C-terminal domain
View	Download	0.711	0.057	flagellum assembly	a.47.2	t-snare proteins
View	Download	0.618	0.008	flagellum assembly	f.36.1	Neurotransmitter-gated ion-channel pransmembrane pore
View	Download	0.638	N/A	N/A	a.47.2	t-snare proteins
View	Download	0.587	N/A	N/A	f.36.1	Neurotransmitter-gated ion-channel pransmembrane pore

Predicted Domain #2

Region A:
Residues: [144-313]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLPGDSKAFL AQLSLPAQLA SQQSGVPHHL ILAQAALESG WGQRQIRREN GEPSYNLFGV  60
   61 KASGNWKGPV TEITTTEYEN GEAKKVKAKF RVYSSYLEAL SDYVGLLTRN PRYAAVTTAA 120
  121 SAEQGAQALQ DAGYATDPHY ARKLTNMIQQ MKSISDKVSK TYSMNIDNLF

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	75.221849
Match:	PF01832.11
Description:	No description for PF01832.11 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits