YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGC_ECOLI
Organism:	Escherichia coli
Length:	134 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|83572535, gi\|... - gi\|83589621\|ref\|YP_429630.1\| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC 3907...	125.0	[0..1]	[134..1]
gi\|37525839, gi\|... - gi\|37525839\|ref\|NP_929183.1\| flagellar basal body rod protein FlgC [Photorhabdus luminescens subsp. ...	124.0	[0..1]	[134..1]
gi\|67154556 - gi\|67154556\|ref\|ZP_00416301.1\| Flagellar basal-body rod protein FlgC [Azotobacter vinelandii AvOP] gi\|67154556, gi\|... - gi\|67154556\|ref\|ZP_00416301.1\| Flagellar basal-body rod protein FlgC [Azotobacter vinelandii AvOP], ...	124.0	[0..1]	[133..1]
gi\|4981925, gi\|1... - gi\|4981925\|gb\|AAD36435.1\|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]... gi\|7451224 - pir\|\|F72263 flagellar basal-body rod protein FlgC - Thermotoga maritima (strain MSB8)	123.0	[0..1]	[134..2]
gi\|166854572, gi... - gi\|167040332\|ref\|YP_001663317.1\| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]... gi\|241903050, gi... - gi\|241903050\|ref\|ZP_04787779.1\| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii su... gi\|242231932, gi... - gi\|242256559\|ref\|ZP_04801448.1\| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513],... gi\|76588178, gi\|... - gi\|76796414\|ref\|ZP_00778776.1\| Flagellar basal-body rod protein FlgC [Thermoanaerobacter ethanolicus...	122.0	[0..1]	[134..1]
gi\|89210115, gi\|... - gi\|89210115\|ref\|ZP_01188507.1\| Flagellar basal-body rod protein FlgC [Halothermothrix orenii H 168],...	122.0	[0..3]	[134..1]
gi\|146274523, gi... - gi\|98662234\|dbj\|GAA00785.1\| unnamed protein product [Pelotomaculum thermopropionicum SI], gi\|1476784...	121.0	[0..1]	[134..1]
gi\|56419752, gi\|... - gi\|56419752\|ref\|YP_147070.1\| flagellar basal body rod protein FlgC [Geobacillus kaustophilus HTA426]...	120.0	[0..1]	[134..1]
gi\|20807891, gi\|... - gi\|20807891\|ref\|NP_623062.1\| flagellar basal body rod protein [Thermoanaerobacter tengcongensis MB4]... gi\|20807891 - gi\|20807891\|ref\|NP_623062.1\| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis MB4]	120.0	[0..1]	[134..1]
gi\|50120637, gi\|... - gi\|50120637\|ref\|YP_049804.1\| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum SCRI...	119.0	[0..1]	[134..1]

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Predicted Domain #1

Region A:
Residues: [1-134]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLNIFDIA GSALTAQSQR LNVAASNLAN ADSVTGPDGQ PYRAKQVVFQ VNAAPGAATG  60
   61 GVKVADVIES QAPDKLVYEP GNPLADAKGY VKMPNVDVVG EMVNTMSASR SYQANVEVLN 120
  121 TVKSMMLKTL TLGQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	8.09691
Match:	1wlgA
Description:	Crystal structure of FlgE31, a major fragment of the hook protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits