YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGC_AGRFC
Organism:	Agrobacterium tumefaciens str. C58
Length:	139 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGC_AGRFC.

Description	E-value	Query Range	Subject Range
gi\|83572535, gi\|... - gi\|83589621\|ref\|YP_429630.1\| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC 3907...	118.0	[0..2]	[136..1]
gi\|4981925, gi\|1... - gi\|4981925\|gb\|AAD36435.1\|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]... gi\|7451224 - pir\|\|F72263 flagellar basal-body rod protein FlgC - Thermotoga maritima (strain MSB8)	118.0	[0..1]	[137..1]
gi\|218249308, gi... - gi\|218249308\|ref\|YP_002374816.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7], g... gi\|221217671, gi... - gi\|221217671\|ref\|ZP_03589139.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a], gi... gi\|223888936, gi... - gi\|223888936\|ref\|ZP_03623527.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b], gi... gi\|224533191, gi... - gi\|224533191\|ref\|ZP_03673791.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi WI91-23]... gi\|225370268, gi... - gi\|225549042\|ref\|ZP_03770017.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a], gi... gi\|195941353 - gi\|195941353\|ref\|ZP_03086735.1\| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a] gi\|226234013, gi... - gi\|226320594\|ref\|ZP_03796154.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805], ... gi\|216264936, gi... - gi\|216264936\|ref\|ZP_03436928.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a], g... FLGC_BORBU - Flagellar basal-body rod protein FlgC OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 ... gi\|225550067, gi... - gi\|225550067\|ref\|ZP_03771027.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a], g... gi\|224533682, gi... - gi\|224533682\|ref\|ZP_03674270.1\| flagellar basal-body rod protein FlgC [Borrelia burgdorferi CA-11.2a... FLGC_BORBU - Flagellar basal-body rod protein flgC OS=Borrelia burgdorferi GN=flgC PE=3 SV=1	117.0	[0..2]	[137..1]
gi\|37525839, gi\|... - gi\|37525839\|ref\|NP_929183.1\| flagellar basal body rod protein FlgC [Photorhabdus luminescens subsp. ...	117.0	[0..2]	[136..1]
gi\|110890392, gi... - gi\|111115118\|ref\|YP_709736.1\| flagellar basal body rod protein FlgC [Borrelia afzelii PKo], gi\|11089...	116.0	[0..2]	[137..1]
gi\|67154556 - gi\|67154556\|ref\|ZP_00416301.1\| Flagellar basal-body rod protein FlgC [Azotobacter vinelandii AvOP] gi\|67154556, gi\|... - gi\|67154556\|ref\|ZP_00416301.1\| Flagellar basal-body rod protein FlgC [Azotobacter vinelandii AvOP], ...	115.0	[0..2]	[137..1]
gi\|56419752, gi\|... - gi\|56419752\|ref\|YP_147070.1\| flagellar basal body rod protein FlgC [Geobacillus kaustophilus HTA426]...	115.0	[0..2]	[136..1]
gi\|23016761 - gi\|23016761\|ref\|ZP_00056514.1\| COG1558: Flagellar basal body rod protein [Magnetospirillum magnetota...	114.0	[0..1]	[136..3]
gi\|89210115, gi\|... - gi\|89210115\|ref\|ZP_01188507.1\| Flagellar basal-body rod protein FlgC [Halothermothrix orenii H 168],...	114.0	[0..4]	[137..1]
gi\|51573124, gi\|... - gi\|51598553\|ref\|YP_072741.1\| flagellar basal body rod protein FlgC [Borrelia garinii PBi], gi\|515731...	114.0	[0..2]	[137..1]

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Predicted Domain #1

Region A:
Residues: [1-139]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLSAASKI AGSGLEVQST RLRIVSENIA NARSTGDTPG ADPYRRKTVT FGSELDHVSG  60
   61 VERVKVKKLG VDRGDFVHEY DPGNPAADTN GMVKMPNVNV LIEMADMREA NRSYDANLQV 120
  121 IRQTRDLVAS TIDLLKASQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	3.09691
Match:	1wlgA
Description:	Crystal structure of FlgE31, a major fragment of the hook protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits