YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGA_ECOLI
Organism:	Escherichia coli
Length:	219 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGA_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|77975730, gi\|... - gi\|77975730\|ref\|ZP_00831264.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia f...	211.0	[0..2]	[219..9]
gi\|238799103, gi... - gi\|77960291\|ref\|ZP_00824170.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia m...	208.0	[0..2]	[219..17]
gi\|77979940, gi\|... - gi\|77979940\|ref\|ZP_00835356.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia i...	206.0	[0..4]	[219..11]
gi\|238785501, gi... - gi\|77957056\|ref\|ZP_00821123.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia b...	205.0	[0..2]	[219..17]
gi\|108812487, gi... - gi\|108812487\|ref\|YP_648254.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis... gi\|108807169, gi... - gi\|108807169\|ref\|YP_651085.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis... gi\|145598614, gi... - gi\|145598614\|ref\|YP_001162690.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pes...	194.0	[0..2]	[219..34]
gi\|166210809, gi... - gi\|166210809\|ref\|ZP_02236844.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|166010841, gi... - gi\|166010841\|ref\|ZP_02231739.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|166961938, gi... - gi\|167420243\|ref\|ZP_02311996.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|167049407, gi... - gi\|167401018\|ref\|ZP_02306521.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|162352268, gi... - gi\|77636012\|ref\|ZP_00798090.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia p... gi\|167469716 - gi\|167469716\|ref\|ZP_02334420.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis F... gi\|167425844, gi... - gi\|167425844\|ref\|ZP_02317597.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|22126394, gi\|... - gi\|22126394\|ref\|NP_669817.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis ... gi\|45441413, gi\|... - gi\|45441413\|ref\|NP_992952.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis ... gi\|89105476, gi\|... - gi\|89105476\|ref\|ZP_01177995.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia p... gi\|165926043, gi... - gi\|165926043\|ref\|ZP_02221875.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b...	194.0	[0..2]	[219..37]
FLGA_YEREN - Flagella basal body P-ring formation protein FlgA OS=Yersinia enterocolitica GN=flgA PE=3 SV=1	193.0	[0..9]	[219..14]
gi\|117673903, gi... - gi\|77628870\|ref\|ZP_00791456.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia p...	193.0	[0..2]	[219..37]
gi\|51589289, gi\|... - gi\|51596007\|ref\|YP_070198.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudot... Q66BU6\|Q66BU6_YERPS - Flagella basal body P-ring formation protein FlgA precursor - Yersinia pseudotuberculosis	192.0	[0..2]	[219..15]
gi\|25323457 - pir\|\|AC0219 flagella basal body P-ring formation protein FlgA [imported] - Yersinia pestis (strain C... gi\|16122050, gi\|... - gi\|218928918\|ref\|YP_002346793.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pes... gi\|149366255, gi... - gi\|149366255\|ref\|ZP_01888290.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis C... gi\|229897899, gi... - gi\|229897899\|ref\|ZP_04513050.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|229902869, gi... - gi\|229902869\|ref\|ZP_04517986.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis N... gi\|229896238, gi... - gi\|229896238\|ref\|ZP_04511408.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis P... gi\|229693510, gi... - gi\|229897173\|ref\|ZP_04512329.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b...	191.0	[0..2]	[219..15]

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Predicted Domain #1

Region A:
Residues: [1-81]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIIKRSVAI IAILFSPLST ASNLTSQLHN FFSAQLAGVS DEVRVSIRTA PNLLPPCEQP  60
   61 LLSMSNNSRL WGNVNVLARC G

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [82-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDKRYLQVNV QATGNYVVAA MPIARGGKLE AGNVKLKRGR LDTLPPRTVL DINQLVDAIS  60
   61 LRDLSPDQPI QLTQFRQAWR VKAGQRVNVI ASGDGFSANA EGQALNNAAV AQNARVRMVS 120
  121 GQVVSGVVDA DGNILINL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.76
Match:	1wvoA
Description:	Solution structure of RSGI RUH-029, an antifreeze protein like domain in human N-acetylneuraminic acid phosphate synthase gene.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits