YRC Public Data Repository - Protein Structure Prediction

Protein:	FEPE_ECOLI
Organism:	Escherichia coli
Length:	377 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FEPE_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|117622809, gi... - gi\|117622809\|ref\|YP_851722.1\| ferric enterobactin transport protein FepE [Escherichia coli APEC O1],...	189.0	[0..1]	[370..41]
gi\|15800302, gi\|... - gi\|15800302\|ref\|NP_286314.1\| ferric enterobactin transport protein FepE [Escherichia coli O157:H7 ED... gi\|209398787, gi... - gi\|209398787\|ref\|YP_002269221.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H... gi\|208823295, gi... - gi\|208823295\|ref\|ZP_03263613.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7... gi\|217322349, gi... - gi\|217326128\|ref\|ZP_03442212.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7... gi\|195936135 - gi\|195936135\|ref\|ZP_03081517.1\| ferric enterobactin transport protein FepE [Escherichia coli O157:H7... gi\|15829880, gi\|... - gi\|15829880\|ref\|NP_308653.1\| ferric enterobactin transport protein FepE [Escherichia coli O157:H7 st... gi\|168798144, gi... - gi\|189379320\|gb\|EDU97736.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|208815096, gi... - gi\|208815096\|ref\|ZP_03256275.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7... gi\|208726064, gi... - gi\|208806263\|ref\|ZP_03248600.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7... gi\|168774646, gi... - gi\|187769758\|gb\|EDU33602.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|189360891, gi... - gi\|189360891\|gb\|EDU79310.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|189373494, gi... - gi\|189373494\|gb\|EDU91910.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|168779074, gi... - gi\|189003083\|gb\|EDU72069.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|168747745, gi... - gi\|188017737\|gb\|EDU55859.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|254791754, gi... - gi\|254791754\|ref\|YP_003076591.1\| regulator of length of O-antigen component of lipopolysaccharide ch... gi\|168760267, gi... - gi\|189369125\|gb\|EDU87541.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|168754684, gi... - gi\|189358085\|gb\|EDU76504.1\| ferric enterobactin transport protein fepE [Escherichia coli O157:H7 str... gi\|82775867, gi\|... - gi\|82775867\|ref\|YP_402214.1\| ferric enterobactin transport protein FepE [Shigella dysenteriae Sd197]... gi\|15829880, gi\|... - gi\|15829880\|ref\|NP_308653.1\| ferric enterobactin (enterochelin) transport [Escherichia coli O157:H7]... gi\|209777586, gi... - pir\|\|F85557 ferric enterobactin (enterochelin) transport [imported] - Escherichia coli (strain O157:...	187.0	[0..1]	[370..1]
gi\|110640818, gi... - gi\|110640818\|ref\|YP_668546.1\| ferric enterobactin transport protein FepE [Escherichia coli 536], gi\|... gi\|190907431, gi... - gi\|191172332\|ref\|ZP_03033874.1\| ferric enterobactin transport protein fepE [Escherichia coli F11], g...	186.0	[0..1]	[370..1]
gi\|91209634, gi\|... - gi\|91209634\|ref\|YP_539620.1\| ferric enterobactin transport protein FepE [Escherichia coli UTI89], gi... gi\|226898650, gi... - gi\|237707440\|ref\|ZP_04537921.1\| ferric enterobactin transporter FepE [Escherichia sp. 3_2_53FAA], gi... gi\|218557528, gi... - gi\|218557528\|ref\|YP_002390441.1\| ferric enterobactin transport protein FepE [Escherichia coli S88], ...	186.0	[0..1]	[370..1]
gi\|74311122, gi\|... - gi\|74311122\|ref\|YP_309541.1\| ferric enterobactin transport protein FepE [Shigella sonnei Ss046], gi\|...	185.0	[0..1]	[370..1]
gi\|81244444, gi\|... - gi\|82543033\|ref\|YP_406980.1\| ferric enterobactin transport protein FepE [Shigella boydii Sb227], gi\|...	184.0	[0..1]	[370..1]
gi\|26106965, gi\|... - gi\|26246566\|ref\|NP_752605.1\| ferric enterobactin transport protein FepE [Escherichia coli CFT073], g... gi\|227884432, gi... - gi\|227884432\|ref\|ZP_04002237.1\| ferric enterobactin transport protein FepE [Escherichia coli 83972],...	181.0	[0..1]	[370..1]
gi\|62179190, gi\|... - gi\|62179190\|ref\|YP_215607.1\| ferric enterobactin transport protein FepE [Salmonella enterica subsp. ...	171.0	[0..1]	[377..10]
gi\|22124989, gi\|... - gi\|22124989\|ref\|NP_668412.1\| ferric enterobactin transport protein FepE [Yersinia pestis KIM], gi\|21... gi\|167423166, gi... - gi\|167423166\|ref\|ZP_02314919.1\| chain length determinant family protein Wzz [Yersinia pestis biovar ...	170.0	[0..1]	[374..1]
gi\|51588646, gi\|... - gi\|51595364\|ref\|YP_069555.1\| ferric enterobactin transport protein FepE [Yersinia pseudotuberculosis... gi\|662300, gi\|23... - gi\|662300\|gb\|AAC44859.1\| chain length determinant, gi\|23321138\|gb\|AAN23077.1\|AF461770_17 O-antigen c... gi\|6580729 - gi\|6580729\|emb\|CAB63305.1\| O-antigen chain length determinant-like protein [Yersinia pseudotuberculo... gi\|153950685, gi... - gi\|153950685\|ref\|YP_001401996.1\| ferric enterobactin transport protein FepE [Yersinia pseudotubercul...	170.0	[0..1]	[374..1]

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Predicted Domain #1

Region A:
Residues: [1-198]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLNIKQGS DAHFPDYPLA SPSNNEIDLL NLISVLWRAK KTVMAVVFAF ACAGLLISFI  60
   61 LPQKWTSAAV VTPPEPVQWQ ELEKSFTKLR VLDLDIKIDR TEAFNLFIKK FQSVSLLEEY 120
  121 LRSSPYVMDQ LKEAKIDELD LHRAIVALSE KMKAVDDNAS KKKDEPSLYT SWTLSFTAPT 180
  181 SEEAQTVLSG YIDYISTL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	34.677781
Match:	PF02706.6
Description:	No description for PF02706.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [199-377]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVKESLENVR NKLEIKTQFE KEKLAQDRIK TKNQLDANIQ RLNYSLDIAN AAGIKKPVYS  60
   61 NGQAVKDDPD FSISLGADGI ERKLEIEKAV TDVAELNGEL RNRQYLVEQL TKAHVNDVNF 120
  121 TPFKYQLSPS LPVKKDGPGK AIIVILSALI GGMVACGGVL LRYAMASRKQ DAMMADHLV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits