YRC Public Data Repository - Protein Structure Prediction

Protein:	FECE_ECOLI
Organism:	Escherichia coli
Length:	255 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FECE_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|82724967, gi\|... - gi\|82747099\|ref\|ZP_00909599.1\| ATPas [Clostridium beijerincki NCIMB 8052], gi\|82724967\|gb\|EAP59716.1...	318.0	[0..2]	[242..1]
CYSA_BACCR - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 /... gi\|228656892, gi... - gi\|229126503\|ref\|ZP_04255517.1\| Sulphate transport system permease protein 1 [Bacillus cereus BDRD-C...	316.0	[0..1]	[249..1]
gi\|11528330 - gi\|11528330\|gb\|AAG37225.1\|AF298223_3 glutamine ABC transporter, ATP-binding subunit [Methanococcus m... gi\|45047352, gi\|... - gi\|45357792\|ref\|NP_987349.1\| amino acid ABC transporter ATP-binding protein [Methanococcus maripalud...	315.0	[0..2]	[244..1]
gi\|89205648, gi\|... - gi\|89205648\|ref\|ZP_01184216.1\| Sulphate transport system permease protein 1 [Bacillus weihenstephane...	315.0	[0..1]	[249..1]
gi\|56420511, gi\|... - gi\|56420511\|ref\|YP_147829.1\| glutamine ABC transporter ATP-binding protein [Geobacillus kaustophilus...	315.0	[0..2]	[244..1]
CYSA_BACC1 - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 10987 / NRS 248)...	314.0	[0..1]	[249..1]
GLNQ_GEOSE - Glutamine transport ATP-binding protein GlnQ OS=Geobacillus stearothermophilus GN=glnQ PE=2 SV=1	314.0	[0..2]	[244..1]
gi\|194467497, gi... - gi\|92090286\|ref\|ZP_01275165.1\| ABC transporter related [Lactobacillus reuteri 100-23], gi\|91802944\|g...	314.0	[0..3]	[242..7]
gi\|27365997, gi\|... - gi\|27365997\|ref\|NP_761525.1\| ABC-type polar amino acid transport system, ATPase component [Vibrio vu... gi\|37679738, gi\|... - gi\|37679738\|ref\|NP_934347.1\| ABC-type polar amino acid transport system, ATPase component [Vibrio vu...	314.0	[0..2]	[244..8]
gi\|18309584, gi\|... - gi\|18309584\|ref\|NP_561518.1\| amino acid ABC transporter [Clostridium perfringens str. 13], gi\|181442... gi\|110673840, gi... - gi\|110799193\|ref\|YP_695036.1\| amino acid ABC transporter, ATP-binding protein [Clostridium perfringe...	313.0	[0..2]	[242..1]

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Predicted Domain #1

Region A:
Residues: [1-255]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRTENLTV SYGTDKVLND VSLSLPTGKI TALIGPNGCG KSTLLNCFSR LLMPQSGTVF  60
   61 LGDNPINMLS SRQLARRLSL LPQHHLTPEG ITVQELVSYG RNPWLSLWGR LSAEDNARVN 120
  121 VAMNQTRINH LAVRRLTELS GGQRQRAFLA MVLAQNTPVV LLDEPTTYLD INHQVDLMRL 180
  181 MGELRTQGKT VVAVLHDLNQ ASRYCDQLVV MANGHVMAQG TPEEVMTPGL LRTVFSVEAE 240
  241 IHPEPVSGRP MCLMR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	80.09691
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits