YRC Public Data Repository - Protein Structure Prediction

Protein:	ETP_ECOLI
Organism:	Escherichia coli
Length:	148 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ETP_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|86164747, gi\|... - gi\|87120045\|ref\|ZP_01075941.1\| putative protein-tyrosine-phosphatase [Marinomonas sp. MED121], gi\|86...	164.0	[0..5]	[146..1]
gi\|193069271, gi... - gi\|75236257\|ref\|ZP_00720366.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli E110019], gi\|... gi\|75210010, gi\|... - gi\|75210010\|ref\|ZP_00710193.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli B171], gi\|194...	162.0	[0..5]	[147..1]
gi\|110806030, gi... - gi\|110806030\|ref\|YP_689550.1\| tyrosine phosphatase [Shigella flexneri 5 str. 8401], gi\|110615578\|gb\|...	161.0	[0..5]	[147..1]
gi\|74267860 - gi\|74267860\|gb\|AAI03028.1\| ACP1 protein [Bos taurus]	161.0	[0..1]	[147..1]
gi\|218357017, gi... - gi\|218549476\|ref\|YP_002383267.1\| tyrosine phosphatase [Escherichia fergusonii ATCC 35469], gi\|218357... gi\|91072922, gi\|... - gi\|91211348\|ref\|YP_541334.1\| tyrosine phosphatase [Escherichia coli UTI89], gi\|91072922\|gb\|ABE07803....	161.0	[0..5]	[147..1]
gi\|24113445, gi\|... - gi\|24113445\|ref\|NP_707955.1\| tyrosine phosphatase [Shigella flexneri 2a str. 301], gi\|24052473\|gb\|AA... gi\|30041763, gi\|... - gi\|30063510\|ref\|NP_837681.1\| tyrosine phosphatase [Shigella flexneri 2a str. 2457T], gi\|30041763\|gb\|...	161.0	[0..5]	[147..1]
gi\|109157606\|pdb... - Chain A, Structure Of A Protein Tyrosine Phosphatase gi\|109157606 - gi\|109157606\|pdb\|2FEK\|A Chain A, Structure Of A Protein Tyrosine Phosphatase	161.0	[0..5]	[147..21]
gi\|115513381, gi... - gi\|117624257\|ref\|YP_853170.1\| tyrosine phosphatase [Escherichia coli APEC O1], gi\|115513381\|gb\|ABJ01... gi\|218365709, gi... - gi\|218558940\|ref\|YP_002391853.1\| tyrosine phosphatase [Escherichia coli S88], gi\|218365709\|emb\|CAR03... gi\|226900882, gi... - gi\|237704516\|ref\|ZP_04534997.1\| tyrosine phosphatase [Escherichia sp. 3_2_53FAA], gi\|226900882\|gb\|EE...	160.0	[0..5]	[147..1]
gi\|227835465, gi... - gi\|227887115\|ref\|ZP_04004920.1\| protein-tyrosine-phosphatase [Escherichia coli 83972], gi\|227835465\|... gi\|238863324, gi... - gi\|238901251\|ref\|YP_002927047.1\| protein-tyrosine phosphatase [Escherichia coli BW2952], gi\|23886332... gi\|168750429, gi... - gi\|188015392\|gb\|EDU53514.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|251785439, gi... - gi\|251785439\|ref\|YP_002999743.1\| hypothetical protein B21_01956 [Escherichia coli BL21], gi\|24237771... gi\|254288841, gi... - gi\|254288841\|ref\|YP_003054589.1\| protein-tyrosine phosphatase [Escherichia coli BL21(DE3)], gi\|25397... gi\|254162053, gi... - gi\|254162053\|ref\|YP_003045161.1\| protein-tyrosine phosphatase [Escherichia coli B str. REL606], gi\|2... gi\|254793845, gi... - gi\|254793845\|ref\|YP_003078682.1\| protein-tyrosine phosphatase [Escherichia coli O157:H7 str. TW14359... WZB_ECO57 - Low molecular weight protein-tyrosine-phosphatase Wzb OS=Escherichia coli O157:H7 GN=wzb PE=3 SV=1 gi\|15832120, gi\|... - gi\|15832120\|ref\|NP_310893.1\| tyrosine phosphatase [Escherichia coli O157:H7 str. Sakai], gi\|13362335... gi\|12516258, gi\|... - gi\|15802541\|ref\|NP_288567.1\| tyrosine phosphatase [Escherichia coli O157:H7 EDL933], gi\|12516258\|gb\|... gi\|124528694, gi... - gi\|124528694\|ref\|ZP_01699952.1\| protein tyrosine phosphatase [Escherichia coli B], gi\|124500381\|gb\|E... EG13567 - colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase / Protein-tyrosine-phosp... gi\|170683201, gi... - gi\|170683201\|ref\|YP_001743080.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia ... gi\|170081691, gi... - gi\|170081691\|ref\|YP_001731011.1\| protein-tyrosine phosphatase [Escherichia coli str. K-12 substr. DH... gi\|208727581, gi... - gi\|208807780\|ref\|ZP_03250117.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia c... gi\|195938254 - gi\|195938254\|ref\|ZP_03083636.1\| tyrosine phosphatase [Escherichia coli O157:H7 str. EC4024] gi\|110343863, gi... - gi\|110642271\|ref\|YP_670001.1\| tyrosine phosphatase [Escherichia coli 536], gi\|110343863\|gb\|ABG70100.... gi\|208740485, gi... - gi\|208820362\|ref\|ZP_03260682.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia c... gi\|208817227, gi... - gi\|208817227\|ref\|ZP_03258319.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia c... gi\|209912785, gi... - gi\|209919526\|ref\|YP_002293610.1\| tyrosine phosphatase [Escherichia coli SE11], gi\|209912785\|dbj\|BAG7... gi\|209400491, gi... - gi\|209400491\|ref\|YP_002271304.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia ... gi\|168761804, gi... - gi\|189367813\|gb\|EDU86229.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|189355146, gi... - gi\|189355146\|gb\|EDU73565.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|168775489, gi... - gi\|187768927\|gb\|EDU32771.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|189361241, gi... - gi\|189361241\|gb\|EDU79660.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|189371569, gi... - gi\|189371569\|gb\|EDU89985.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|168782346, gi... - gi\|189000175\|gb\|EDU69161.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... gi\|169754540, gi... - gi\|170019612\|ref\|YP_001724566.1\| tyrosine phosphatase [Escherichia coli ATCC 8739], gi\|169754540\|gb\|... gi\|168799056, gi... - gi\|189378391\|gb\|EDU96807.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia coli ... EG13567 - colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase / Protein-tyrosine-phosp... WZB_ECOLI - Low molecular weight protein-tyrosine-phosphatase wzb (EC 3.1.3.48) - Escherichia coli gi\|85675204, gi\|... - gi\|89108881\|ref\|AP_002661.1\| protein-tyrosine phosphatase [Escherichia coli str. K-12 substr. W3110]... gi\|217317363, gi... - gi\|217329595\|ref\|ZP_03445674.1\| low molecular weight protein-tyrosine-phosphatase wzb [Escherichia c... gi\|215265356, gi... - gi\|215487284\|ref\|YP_002329715.1\| tyrosine phosphatase [Escherichia coli O127:H6 str. E2348/69], gi\|2... gi\|193062773, gi... - gi\|75259199\|ref\|ZP_00730547.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli E22], gi\|1930... gi\|218427683, gi... - gi\|218690119\|ref\|YP_002398331.1\| tyrosine phosphatase [Escherichia coli ED1a], gi\|218427683\|emb\|CAR0... gi\|73856063, gi\|... - gi\|74312586\|ref\|YP_311005.1\| tyrosine phosphatase [Shigella sonnei Ss046], gi\|73856063\|gb\|AAZ88770.1... gi\|218361397, gi... - gi\|218554629\|ref\|YP_002387542.1\| tyrosine phosphatase [Escherichia coli IAI1], gi\|218361397\|emb\|CAQ9... gi\|218369333, gi... - gi\|218699347\|ref\|YP_002406976.1\| tyrosine phosphatase [Escherichia coli IAI39], gi\|218369333\|emb\|CAR... gi\|218695684, gi... - gi\|218695684\|ref\|YP_002403351.1\| tyrosine phosphatase [Escherichia coli 55989], gi\|218352416\|emb\|CAU... gi\|168986443 - gi\|168986443\|dbj\|BAG11981.1\| protein-tyrosine phosphatase Wzb [Escherichia coli O55:H6] gi\|168986386, gi... - gi\|168986386\|dbj\|BAG11925.1\| protein-tyrosine phosphatase Wzb [Escherichia coli O55:H7], gi\|16898632... gi\|194436015, gi... - gi\|83588054\|ref\|ZP_00926679.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli 101-1], gi\|19... gi\|191168857, gi... - gi\|75227914\|ref\|ZP_00714618.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli B7A], gi\|7522... gi\|75242883, gi\|... - gi\|75242883\|ref\|ZP_00726589.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli F11], gi\|1911... gi\|75177181, gi\|... - gi\|75177181\|ref\|ZP_00697279.1\| COG0394: Protein-tyrosine-phosphatase [Shigella boydii BS512], gi\|187... gi\|157158537, gi... - gi\|75186859\|ref\|ZP_00700126.1\| COG0394: Protein-tyrosine-phosphatase [Escherichia coli E24377A], gi\|...	160.0	[0..5]	[147..1]
gi\|82543437, gi\|... - gi\|82543437\|ref\|YP_407384.1\| tyrosine phosphatase [Shigella boydii Sb227], gi\|81244848\|gb\|ABB65556.1...	160.0	[0..5]	[147..1]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLKFNSIL VVCTGNICRS PIGERLLRKR LPGVKVKSAG VHGLVKHPAD ATAADVAANH  60
   61 GVSLEGHAGR KLTAEMARNY DLILAMESEH IAQVTAIAPE VRGKTMLFGQ WLEQKEIPDP 120
  121 YRKSQDAFEH VYGMLERASQ EWAKRLSR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.09691
Match:	2fekA
Description:	No description for 2fekA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits