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View Structure Prediction Details

Protein: DINF_ECOLI
Organism: Escherichia coli
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DINF_ECOLI.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
274.0 [0..11] [453..631]
gi|42551894, gi|... - gi|46123591|ref|XP_386349.1| hypothetical protein FG06173.1 [Gibberella zeae PH-1], gi|42551894|gb|E...
264.0 [0..22] [436..670]
gi|38105054, gi|... - gi|39942086|ref|XP_360580.1| hypothetical protein MG03123.4 [Magnaporthe grisea 70-15], gb|EAA51528....
252.0 [0..22] [451..288]
gi|30047775 - gi|30047775|gb|AAH50592.1| SLC47A1 protein [Homo sapiens]
249.0 [0..18] [453..47]
gi|114668714 - gi|114668714|ref|XP_001144887.1| PREDICTED: hypothetical protein [Pan troglodytes]
241.0 [0..18] [453..27]
gi|49528705 - gi|49528705|emb|CAG62367.1| unnamed protein product [Candida glabrata]
gi|49528705, gi|... - gi|50293959|ref|XP_449391.1| hypothetical protein CAGL0M01078g [Candida glabrata CBS138], gi|4952870...
241.0 [0..16] [451..217]
gi|50758312 - gi|50758312|ref|XP_415860.1| PREDICTED: similar to 1300013J15Rik protein [Gallus gallus]
239.0 [0..22] [453..74]
S47A1_DANRE - Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1
239.0 [0..11] [453..38]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPGVAVCFS SLFIRLVCMA FLTSSDKALW HLALPMIFSN ITVPLLGLVD TAVIGHLDSP  60
   61 VYLGGVAVGA TATSFLFMLL LFLRMSTTGL TAQAYGAKNP QALARTLVQP LLLALGAGAL 120
  121 IALLRTPIID LALHIVGGSE AVLEQARRFL EIRWLSAPAS LANLVLLGWL LGVQYARAPV 180
  181 ILLVVGNILN IVLDVWLVMG LHM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.508638
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVQGAALATV IAEYATLLIG LLMVRKILKL RGISGEMLKT AWRGNFRRLL ALNRDIMLRS  60
   61 LLLQLCFGAI TVLGARLGSD IIAVNAVLMT LLTFTAYALD GFAYAVEAHS GQAYGARDGS 120
  121 QLLDVWRAAC RQSGIVALLF SVVYLLAGEH IIALLTSLTQ IQQLADRYLI WQVILPVVGV 180
  181 WCYLLDGMFI GATRATEMRN SMAVAAAGFA LTLLTLPWLG NHALWLALTV FLALRGLSLA 240
  241 AIWRRHWRNG TWFAAT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.267606
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle