YRC Public Data Repository - Protein Structure Prediction

Protein:	CSGE_ECOLI
Organism:	Escherichia coli
Length:	129 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSGE_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|83570514, gi\|... - gi\|83570514\|ref\|ZP_00921958.1\| COG4670: Acyl CoA:acetate/3-ketoacid CoA transferase [Shigella dysent...	182.0	[0..1]	[129..1]
gi\|24051318, gi\|... - gi\|24112439\|ref\|NP_706949.1\| curli assembly protein CsgE [Shigella flexneri 2a str. 301], gi\|2405131... gi\|30040809, gi\|... - gi\|30062563\|ref\|NP_836734.1\| curli assembly protein CsgE [Shigella flexneri 2a str. 2457T], gi\|30040... gi\|110614596, gi... - gi\|110805048\|ref\|YP_688568.1\| curli assembly protein CsgE [Shigella flexneri 5 str. 8401], gi\|110614...	182.0	[0..1]	[129..1]
gi\|81240453, gi\|... - gi\|82776305\|ref\|YP_402654.1\| curli assembly protein CsgE [Shigella dysenteriae Sd197], gi\|81240453\|g...	182.0	[0..1]	[129..1]
CSGE_SALTY - Curli production assembly/transport component CsgE OS=Salmonella typhimurium GN=csgE PE=4 SV=1 CSGE_SALTI - Curli production assembly/transport component CsgE OS=Salmonella typhi GN=csgE PE=3 SV=1 CSGE_SALTY - Curli production assembly/transport component CsgE OS=Salmonella typhimurium (strain LT2 / SGSC1412 ... CSGE_SALTI - Curli production assembly/transport component csgE OS=Salmonella typhi GN=csgE PE=3 SV=1 gi\|29142211, gi\|... - gi\|29142211\|ref\|NP_805553.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica serova... gi\|16760018 - gi\|16760018\|ref\|NP_455635.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica serova... gi\|161614645, gi... - gi\|161614645\|ref\|YP_001588610.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica se... gi\|205328039, gi... - gi\|205328039\|gb\|EDZ14803.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|168234057, gi... - gi\|205331937\|gb\|EDZ18701.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|213023704 - gi\|213023704\|ref\|ZP_03338151.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|213162402 - gi\|213162402\|ref\|ZP_03348112.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|213420223 - gi\|213420223\|ref\|ZP_03353289.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|213427738 - gi\|213427738\|ref\|ZP_03360488.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|194735309, gi... - gi\|194735309\|ref\|YP_002114138.1\| curli production assembly/transport component CsgE [Salmonella ente... gi\|197261761, gi... - gi\|197261761\|ref\|ZP_03161835.1\| curli production assembly/transport component CsgE [Salmonella enter... gi\|197094271, gi... - gi\|197362794\|ref\|YP_002142431.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica se... gi\|206709154, gi... - gi\|207857351\|ref\|YP_002244002.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica se... gi\|205341008, gi... - gi\|205341008\|gb\|EDZ27772.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|194404628, gi... - gi\|194445965\|ref\|YP_002040394.1\| curli production assembly/transport component CsgE [Salmonella ente... gi\|194408093, gi... - gi\|194449789\|ref\|YP_002045139.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica se... gi\|194454916, gi... - gi\|194468552\|ref\|ZP_03074536.1\| curli production assembly/transport component CsgE [Salmonella enter... gi\|168237216, gi... - gi\|197289790\|gb\|EDY29151.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|205336434, gi... - gi\|205336434\|gb\|EDZ23198.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|205347336, gi... - gi\|205347336\|gb\|EDZ33967.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|168467082, gi... - gi\|195630437\|gb\|EDX49063.1\| curli production assembly/transport component CsgE [Salmonella enterica ... gi\|62179659, gi\|... - gi\|62179659\|ref\|YP_216076.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica serova... gi\|56413871, gi\|... - gi\|56413871\|ref\|YP_150946.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica serova... CSGE_SALTY - Curli production assembly/transport component csgE OS=Salmonella typhimurium GN=csgE PE=4 SV=1 gi\|214002381 - gi\|214002381\|ref\|ZP_03413116.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|224468881, gi... - gi\|224584354\|ref\|YP_002638152.1\| assembly/transport component in curli production [Salmonella enteri... gi\|213581809 - gi\|213581809\|ref\|ZP_03363635.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|213618651 - gi\|213618651\|ref\|ZP_03372477.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|213646855 - gi\|213646855\|ref\|ZP_03376908.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser... gi\|213864884 - gi\|213864884\|ref\|ZP_03387003.1\| curli assembly protein CsgE [Salmonella enterica subsp. enterica ser...	176.0	[0..1]	[129..1]
gi\|113969212, gi... - gi\|82495032\|ref\|ZP_00880610.1\| curli production assembly/transport component CsgE, putative [Shewane...	161.0	[0..2]	[120..6]
gi\|78688743, gi\|... - gi\|78688743\|ref\|ZP_00853410.1\| curli production assembly/transport component CsgE, putative [Shewane...	161.0	[0..2]	[120..6]
gi\|104781914, gi... - gi\|95110901\|emb\|CAK15617.1\| putative curli fiber operon CsgE [Pseudomonas entomophila L48], gi\|10478... gi\|95110901 - gi\|95110901\|emb\|CAK15617.1\| putative curli fiber operon CsgE [Pseudomonas entomophila L48]	161.0	[0..8]	[129..6]
gi\|117614025, gi... - gi\|78684721\|ref\|ZP_00849504.1\| curli production assembly/transport component CsgE, putative [Shewane...	159.0	[0..2]	[120..6]
gi\|77362113, gi\|... - gi\|77362113\|ref\|YP_341687.1\| curli production assembly/transport component [Pseudoalteromonas halopl...	157.0	[0..4]	[129..8]
gi\|68521854, gi\|... - gi\|68540635\|ref\|ZP_00580386.1\| curli production assembly/transport component CsgE, putative [Shewane... gi\|217497346, gi... - gi\|217972211\|ref\|YP_002356962.1\| curli production assembly/transport component CsgE, putative [Shewa... gi\|160874156, gi... - gi\|160874156\|ref\|YP_001553472.1\| curli production assembly/transport component CsgE, putative [Shewa...	156.0	[0..2]	[120..6]

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Predicted Domain #1

Region A:
Residues: [1-129]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRYLRWIVA AEFLFAAGNL HAVEVEVPGL LTDHTVSSIG HDFYRAFSDK WESDYTGNLT  60
   61 INERPSARWG SWITITVNQD VIFQTFLFPL KRDFEKTVVF ALIQTEEALN RRQINQALLS 120
  121 TGDLAHDEF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.801	d.110.4	SNARE-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits