YRC Public Data Repository - Protein Structure Prediction

Protein:	CRCB_ECOLI
Organism:	Escherichia coli
Length:	127 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRCB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|67545817, gi\|... - gi\|67545817\|ref\|ZP_00423736.1\| Camphor resistance CrcB protein [Burkholderia vietnamiensis G4], gi\|6...	117.0	[0..2]	[124..99]
gi\|89321322, gi\|... - gi\|89337738\|ref\|ZP_01190516.1\| Camphor resistance CrcB protein [Mycobacterium flavescens PYR-GCK], g...	110.0	[0..3]	[125..6]
gi\|88941515, gi\|... - gi\|88941515\|ref\|ZP_01146929.1\| crcB protein [Acidiphilium cryptum JF-5], gi\|88919772\|gb\|EAR38909.1\| ...	110.0	[0..1]	[122..69]
gi\|89092931, gi\|... - gi\|89092931\|ref\|ZP_01165883.1\| crcB protein domain protein [Oceanospirillum sp. MED92], gi\|89082956\|...	108.0	[0..2]	[124..1]
gi\|218900224, gi... - gi\|218900224\|ref\|YP_002448635.1\| crcB protein [Bacillus cereus G9842], gi\|218540671\|gb\|ACK93065.1\| c... gi\|75760557, gi\|... - gi\|75760557\|ref\|ZP_00740591.1\| CrcB family protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228791497, gi... - gi\|228968194\|ref\|ZP_04129194.1\| Protein crcB 1 [Bacillus thuringiensis serovar sotto str. T04001], g... gi\|228903577, gi... - gi\|228903577\|ref\|ZP_04067698.1\| Protein crcB 1 [Bacillus thuringiensis IBL 4222], gi\|228856006\|gb\|EE...	107.0	[0..4]	[124..12]
CRCB3_STRAW, CRB... - Protein CrcB homolog 3 OS=Streptomyces avermitilis GN=crcB3 PE=3 SV=1, (Q82LR8) Protein crcB homolog... CRCB3_STRAW - Putative fluoride ion transporter CrcB 3 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 ...	107.0	[0..5]	[126..63]
gi\|158313280, gi... - gi\|68232006\|ref\|ZP_00571163.1\| Camphor resistance CrcB protein [Frankia sp. EAN1pec], gi\|68200366\|gb...	106.0	[0..2]	[121..53]
gi\|30692518, gi\|... - gi\|30692518\|gb\|AAP33390.1\| CrcB [Bacillus thuringiensis serovar aizawai], gi\|221665115\|gb\|ACM24761.1...	106.0	[0..3]	[121..29]
gi\|88183696, gi\|... - gi\|88183696\|gb\|EAQ91164.1\| hypothetical protein CHGG_03099 [Chaetomium globosum CBS 148.51], gi\|1162...	105.0	[0..4]	[127..345]
CRCB_GEOSL - Protein CrcB homolog OS=Geobacter sulfurreducens GN=crcB PE=3 SV=1 CRCB_GEOSL - Protein CrcB homolog OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=crcB PE=3 ...	104.0	[0..2]	[124..17]

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Predicted Domain #1

Region A:
Residues: [1-127]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLLLAVFI GGGTGSVARW LLSMRFNPLH QAIPLGTLTA NLIGAFIIGI GFAWFSRMTN  60
   61 IDPVWKVLIT TGFCGGLTTF STFSAEVVFL LQEGRFGWAL LNVFVNLLGS FAMTALAFWL 120
  121 FSASTAH

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	59.853872
Match:	PF02537.6
Description:	No description for PF02537.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.992	0.040	membrane	a.24.14	FAT domain of focal adhesion kinase

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits