YRC Public Data Repository - Protein Structure Prediction

Protein:	CHEZ_ECOLI
Organism:	Escherichia coli
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHEZ_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|37680646, gi\|... - gi\|37680646\|ref\|NP_935255.1\| chemotaxis protein CheZ [Vibrio vulnificus YJ016], gi\|37199394\|dbj\|BAC9...	248.0	[0..2]	[214..48]
gi\|69166838, gi\|... - gi\|69949614\|ref\|ZP_00637611.1\| Chemotaxis phosphatase, CheZ [Shewanella frigidimarina NCIMB 400], gi...	246.0	[0..2]	[214..29]
gi\|91223564, gi\|... - gi\|91223564\|ref\|ZP_01258829.1\| chemotaxis protein CheZ [Vibrio alginolyticus 12G01], gi\|91191650\|gb\|...	245.0	[0..2]	[214..22]
CHEZ_SALTY - Chemotaxis protein cheZ OS=Salmonella typhimurium GN=cheZ PE=4 SV=1 CHEZ_SALTY - Protein phosphatase CheZ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=cheZ PE=... gi\|205327859, gi... - gi\|205327859\|gb\|EDZ14623.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serovar 4,[... CHEZ_SALTY - Protein phosphatase CheZ OS=Salmonella typhimurium GN=cheZ PE=1 SV=1 gi\|197288668, gi... - gi\|197288668\|gb\|EDY28043.1\| chemotaxis phosphatase CheZ [Salmonella enterica subsp. enterica serovar... gi\|56127422, gi\|... - gi\|56413165\|ref\|YP_150240.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serovar ... lcl\|NC_016856.1_... - [gene=cheZ] [protein=chemotaxis regulator CheZ] [protein_id=YP_005237883.1] [location=complement(202... gi\|197093568, gi... - gi\|197362091\|ref\|YP_002141728.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica sero... gi\|204931092, gi... - gi\|204931092\|ref\|ZP_03221918.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serovar... gi\|205350863, gi... - gi\|205350863\|gb\|EDZ37494.1\| chemotaxis phosphatase CheZ [Salmonella enterica subsp. enterica serovar... gi\|205342730, gi... - gi\|205342730\|gb\|EDZ29494.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serovar Wel... gi\|238912508 - gi\|238912508\|ref\|ZP_04656345.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serov... gi\|194737784, gi... - gi\|194737784\|ref\|YP_002114951.1\| chemotaxis phosphatase CheZ [Salmonella enterica subsp. enterica se... gi\|197248202, gi... - gi\|197248202\|ref\|YP_002146106.1\| chemotaxis protein CheZ [Salmonella enterica subsp. enterica serova...	244.0	[0..1]	[214..1]
gi\|229607391, gi... - gi\|229607391\|ref\|YP_002878039.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae MJ-1236], g... gi\|75829276, gi\|... - gi\|75829276\|ref\|ZP_00758585.1\| COG3143: Chemotaxis protein [Vibrio cholerae MO10], gi\|254849151\|ref\|... CHEZ_VIBC3 - Protein phosphatase CheZ OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O... gi\|9656610, gi\|1... - gi\|9656610\|gb\|AAF95210.1\| chemotaxis protein CheZ [Vibrio cholerae O1 biovar El Tor str. N16961], gi... gi\|11277583 - pir\|\|B82123 chemotaxis protein CheZ VC2064 [imported] - Vibrio cholerae (strain N16961 serogroup O1... gi\|150423107, gi... - gi\|254286816\|ref\|ZP_04961769.1\| chemotaxis protein CheZ [Vibrio cholerae AM-19226], gi\|197751682\|ref... gi\|148875611, gi... - gi\|153828905\|ref\|ZP_01981572.1\| chemotaxis protein CheZ [Vibrio cholerae 623-39], gi\|148875611\|gb\|ED... gi\|149740208, gi... - gi\|153826091\|ref\|ZP_01978758.1\| chemotaxis protein CheZ [Vibrio cholerae MZO-2], gi\|149740208\|gb\|EDM... gi\|153213714, gi... - gi\|153213714\|ref\|ZP_01948966.1\| chemotaxis protein CheZ [Vibrio cholerae 1587], gi\|124115775\|gb\|EAY3... gi\|124119062, gi... - gi\|153222202\|ref\|ZP_01952981.1\| chemotaxis protein CheZ [Vibrio cholerae MAK 757], gi\|124119062\|gb\|E... gi\|124120838, gi... - gi\|153803629\|ref\|ZP_01958215.1\| chemotaxis protein CheZ [Vibrio cholerae MZO-3], gi\|124120838\|gb\|EAY... gi\|126509917, gi... - gi\|153819550\|ref\|ZP_01972217.1\| chemotaxis protein CheZ [Vibrio cholerae NCTC 8457], gi\|126509917\|gb... gi\|126520807, gi... - gi\|229511918\|ref\|ZP_04401397.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae B33], gi\|229... gi\|75818118, gi\|... - gi\|75818118\|ref\|ZP_00748332.1\| COG3143: Chemotaxis protein [Vibrio cholerae V51], gi\|254226074\|ref\|Z... gi\|75815938, gi\|... - gi\|75815938\|ref\|ZP_00746425.1\| COG3143: Chemotaxis protein [Vibrio cholerae V52], gi\|121727363\|ref\|Z... gi\|227082191, gi... - gi\|227082191\|ref\|YP_002810742.1\| chemotaxis protein CheZ [Vibrio cholerae M66-2], gi\|227010079\|gb\|AC... gi\|229507846, gi... - gi\|229507846\|ref\|ZP_04397351.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae BX 330286], ... gi\|229348901, gi... - gi\|229513720\|ref\|ZP_04403182.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae TMA 21], gi\|... gi\|229519054, gi... - gi\|229519054\|ref\|ZP_04408497.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae RC9], gi\|229... gi\|229340948, gi... - gi\|229522023\|ref\|ZP_04411440.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae TM 11079-80]... gi\|229528918, gi... - gi\|229528918\|ref\|ZP_04418308.1\| chemotaxis response - phosphatase CheZ [Vibrio cholerae 12129(1)], g...	243.0	[0..2]	[214..22]
gi\|10566574 - gi\|10566574\|dbj\|BAB15842.1\| CheZ [Enterobacter cloacae]	243.0	[0..14]	[214..15]
gi\|194540482, gi... - gi\|75856735\|ref\|ZP_00764358.1\| COG3143: Chemotaxis protein [Vibrio sp. Ex25], gi\|254228449\|ref\|ZP_04...	243.0	[0..2]	[214..22]
gi\|145526 - gi\|145526\|gb\|AAA23571.1\| cheZ [Escherichia coli]	242.0	[0..1]	[214..1]
tr\|A0A0G3HGQ5\|A0... - Protein phosphatase CheZ OS=Escherichia coli (strain K12) GN=cheZ PE=3 SV=2 gi\|26248148, gi\|... - gi\|26248148\|ref\|NP_754188.1\| Chemotaxis protein cheZ [Escherichia coli CFT073], gi\|26108552\|gb\|AAN80... gi\|209912566, gi... - gi\|209919307\|ref\|YP_002293391.1\| chemotaxis regulator CheZ [Escherichia coli SE11], gi\|209912566\|dbj... gi\|226900594, gi... - gi\|237705837\|ref\|ZP_04536318.1\| chemotaxis protein cheZ [Escherichia sp. 3_2_53FAA], gi\|226900594\|gb... gi\|91072680, gi\|... - gi\|91211106\|ref\|YP_541092.1\| chemotaxis protein CheZ [Escherichia coli UTI89], gi\|91072680\|gb\|ABE075...	242.0	[0..1]	[214..11]
gi\|213426384 - gi\|213426384\|ref\|ZP_03359134.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serov... gi\|213999609 - gi\|213999609\|ref\|ZP_03410344.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serov... gi\|29137071, gi\|... - gi\|29141444\|ref\|NP_804786.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serovar ... gi\|16760864 - gi\|16760864\|ref\|NP_456481.1\| chemotaxis regulator CheZ [Salmonella enterica subsp. enterica serovar ... CHEZ_SALTI - Protein phosphatase CheZ OS=Salmonella typhi GN=cheZ PE=3 SV=1	241.0	[0..1]	[214..1]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQPSIKPAD EHSAGDIIAR IGSLTRMLRD SLRELGLDQA IAEAAEAIPD ARDRLYYVVQ  60
   61 MTAQAAERAL NSVEASQPHQ DQMEKSAKAL TQRWDDWFAD PIDLADAREL VTDTRQFLAD 120
  121 VPAHTSFTNA QLLEIMMAQD FQDLTGQVIK RMMDVIQEIE RQLLMVLLEN IPEQESRPKR 180
  181 ENQSLLNGPQ VDTSKAGVVA SQDQVDDLLD SLGF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	63.69897
Match:	1kmiZ
Description:	Chemotaxis phosphatase CheZ
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits