YRC Public Data Repository - Protein Structure Prediction

Protein:	ASNC_ECOLI
Organism:	Escherichia coli
Length:	152 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASNC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|34102276, gi\|... - gi\|34496423\|ref\|NP_900638.1\| AsnC family transcriptional regulator [Chromobacterium violaceum ATCC 1...	179.0	[0..1]	[152..1]
gi\|70733484, gi\|... - gi\|70733484\|ref\|YP_263259.1\| AsnC family transcriptional regulator [Pseudomonas fluorescens Pf-5], g...	179.0	[0..1]	[152..1]
gi\|83746409, gi\|... - gi\|83746409\|ref\|ZP_00943461.1\| Transcriptional regulator, AsnC family [Ralstonia solanacearum UW551]... gi\|206596047, gi... - gi\|207744640\|ref\|YP_002261032.1\| hypothetical protein RSIPO_02851 [Ralstonia solanacearum IPO1609], ... gi\|206587985, gi... - gi\|207722801\|ref\|YP_002253236.1\| hypothetical protein RSMK05446 [Ralstonia solanacearum MolK2], gi\|2...	177.0	[0..1]	[152..1]
gi\|89359103, gi\|... - gi\|89359103\|ref\|ZP_01196924.1\| regulatory proteins, AsnC/Lrp [Xanthobacter autotrophicus Py2], gi\|89...	176.0	[0..4]	[152..1]
gi\|17430126 - gi\|17430126\|emb\|CAD16811.1\| probable transcription regulator protein [Ralstonia solanacearum GMI1000... gi\|17547821 - gi\|17547821\|ref\|NP_521223.1\| transcription regulator protein [Ralstonia solanacearum GMI1000]	176.0	[0..1]	[152..1]
gi\|33577088, gi\|... - gi\|33602646\|ref\|NP_890206.1\| transcription regulator AsnC [Bordetella bronchiseptica RB50], gi\|33577...	175.0	[0..1]	[152..22]
gi\|33571902, gi\|... - gi\|33592257\|ref\|NP_879901.1\| transcription regulator AsnC [Bordetella pertussis Tohama I], gi\|335719...	174.0	[0..1]	[152..1]
gi\|91689446, gi\|... - gi\|91785492\|ref\|YP_560698.1\| AsnC family transcriptional regulator [Burkholderia xenovorans LB400], ...	174.0	[0..1]	[152..1]
gi\|83953341, gi\|... - gi\|83953341\|ref\|ZP_00962063.1\| transcriptional regulator, AsnC family protein [Sulfitobacter sp. NAS... gi\|83844844, gi\|... - gi\|83944300\|ref\|ZP_00956755.1\| transcriptional regulator, AsnC family protein [Sulfitobacter sp. EE-...	173.0	[0..4]	[152..1]
gi\|33574172 - gi\|33574172\|emb\|CAE38504.1\| AsnC-family transcriptional regulator [Bordetella parapertussis] gi\|33597744 - gi\|33597744\|ref\|NP_885387.1\| transcription regulator AsnC [Bordetella parapertussis 12822]	173.0	[0..1]	[152..5]

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Predicted Domain #1

Region A:
Residues: [1-152]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENYLIDNLD RGILEALMGN ARTAYAELAK QFGVSPGTIH VRVEKMKQAG IITGARIDVS  60
   61 PKQLGYDVGC FIGIILKSAK DYPSALAKLE SLDEVTEAYY TTGHYSIFIK VMCRSIDALQ 120
  121 HVLINKIQTI DEIQSTETLI VLQNPIMRTI KP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.39794
Match:	2cg4A
Description:	No description for 2cg4A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits