YRC Public Data Repository - Protein Structure Prediction

Protein:	ASLB_ECOLI
Organism:	Escherichia coli
Length:	411 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASLB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|189358990, gi... - gi\|189358990\|gb\|EDU77409.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC4... gi\|188015443, gi... - gi\|188015443\|gb\|EDU53565.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC4... gi\|15833984, gi\|... - gi\|15833984\|ref\|NP_312757.1\| putative arylsulfatase regulator [Escherichia coli O157:H7], gi\|1336420... gi\|209753356, gi... - pir\|\|D86066 probable arylsulfatase regulator aslB [imported] - Escherichia coli (strain O157:H7, sub... gi\|189001554, gi... - gi\|189001554\|gb\|EDU70540.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC4... gi\|12518664, gi\|... - gi\|15804388\|ref\|NP_290428.1\| putative arylsulfatase regulator [Escherichia coli O157:H7 EDL933], gi\|... gi\|15833984, gi\|... - gi\|15833984\|ref\|NP_312757.1\| putative arylsulfatase regulator [Escherichia coli O157:H7 str. Sakai],... gi\|168775654, gi... - gi\|187768833\|gb\|EDU32677.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC4... gi\|168768076, gi... - gi\|189362705\|gb\|EDU81124.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC4... gi\|189365795, gi... - gi\|189365795\|gb\|EDU84211.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC4... gi\|254595195, gi... - gi\|254795795\|ref\|YP_003080632.1\| predicted regulator of arylsulfatase activity [Escherichia coli O15... gi\|208734469, gi... - gi\|208813192\|ref\|ZP_03254521.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str.... gi\|208725483, gi... - gi\|208805682\|ref\|ZP_03248019.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str.... gi\|195938086 - gi\|195938086\|ref\|ZP_03083468.1\| putative arylsulfatase regulator [Escherichia coli O157:H7 str. EC40... gi\|189373445, gi... - gi\|189373445\|gb\|EDU91861.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str. EC8... gi\|217322737, gi... - gi\|217326516\|ref\|ZP_03442600.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str.... gi\|209399680, gi... - gi\|209399680\|ref\|YP_002273315.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str... gi\|208821244, gi... - gi\|208821244\|ref\|ZP_03261564.1\| arylsulfatase-activating protein AslB [Escherichia coli O157:H7 str....	304.0	[0..1]	[411..1]
gi\|75230762, gi\|... - gi\|75230762\|ref\|ZP_00717225.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Escherichia c...	304.0	[0..1]	[411..1]
gi\|157158579, gi... - gi\|75188543\|ref\|ZP_00701810.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Escherichia c... gi\|218363129, gi... - gi\|218556360\|ref\|YP_002389274.1\| regulator of arylsulfatase activity [Escherichia coli IAI1], gi\|218... gi\|82546152, gi\|... - gi\|82546152\|ref\|YP_410099.1\| putative arylsulfatase regulator [Shigella boydii Sb227], gi\|81247563\|g... gi\|75209573 - gi\|75209573\|ref\|ZP_00709794.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Escherichia c... gi\|193065684, gi... - gi\|75256275\|ref\|ZP_00727953.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Escherichia c...	304.0	[0..1]	[411..1]
gi\|74314312, gi\|... - gi\|74314312\|ref\|YP_312731.1\| putative arylsulfatase regulator [Shigella sonnei Ss046], gi\|73857789\|g...	303.0	[0..1]	[411..1]
gi\|187733692, gi... - gi\|75179677\|ref\|ZP_00699664.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Shigella boyd...	302.0	[0..1]	[411..1]
gi\|194434065, gi... - gi\|83569368\|ref\|ZP_00920823.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Shigella dyse... gi\|110807513, gi... - gi\|110807513\|ref\|YP_691033.1\| putative arylsulfatase regulator [Shigella flexneri 5 str. 8401], gi\|1...	302.0	[0..1]	[411..1]
gi\|30064908, gi\|... - gi\|30064908\|ref\|NP_839079.1\| putative arylsulfatase regulator [Shigella flexneri 2a str. 2457T], gi\|... gi\|56480438, gi\|... - gi\|56480438\|ref\|NP_709601.2\| putative arylsulfatase regulator [Shigella flexneri 2a str. 301], gi\|56...	302.0	[0..1]	[411..1]
gi\|75197684, gi\|... - gi\|75197684\|ref\|ZP_00707754.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Escherichia c...	301.0	[0..1]	[411..1]
gi\|188489292, gi... - gi\|75512643\|ref\|ZP_00735155.1\| COG0641: Arylsulfatase regulator (Fe-S oxidoreductase) [Escherichia c...	301.0	[0..1]	[411..1]
gi\|148199 - gi\|148199\|gb\|AAA67596.1\| unknown [Escherichia coli] gi\|148199\|gb\|AAA... - unknown [Escherichia coli]	300.0	[0..1]	[411..1]

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Predicted Domain #1

Region A:
Residues: [1-411]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQQVPTRAF HVMAKPSGSD CNLNCDYCFY LEKQSLYREK PVTHMDDDTL EAYVRHYIAA  60
   61 SEPQNEVAFT WQGGEPTLLG LAFYRRAVAL QAKYGAGRKI SNSFQTNGVL LDDEWCAFLA 120
  121 EHHFLVGLSL DGPPEIHNQY RVTKGGRPTH KLVMRALTLL QKHHVDYNVL VCVNRTSAQQ 180
  181 PLQVYDFLCD AGVEFIQFIP VVERLADETT ARDGLKLHAP GDIQGELTEW SVRPEEFGEF 240
  241 LVAIFDHWIK RDVGKIFVMN IEWAFANFVG APGAVCHHQP TCGRSVIVEH NGDVYACDHY 300
  301 VYPQYRLGNM HQQTIAEMID SPQQQAFGED KFKQLPAQCR SCNVLKACWG GCPKHRFMLD 360
  361 ASGKPGLNYL CAGYQRYFRH LPPYLKAMAD LLAHGRPASD IMHAHLLVVS K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.39794
Match:	1tv7A
Description:	Structure of the S-adenosylmethionine dependent Enzyme MoaA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.85375915825216	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: